Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01857 ATGGAAGCTGCCATTAATGGTGAAAACAGAAATGTTGCAGAAGACAAAGAAACTGATGAACAACTTCGTCTCAAGAAGATGATTGCTAACCATCCTTTGTATGGCATTTTGATCCAGTCTCACTGCAACTGTTTGAAGGTGGGATTTGGTGAAATTGAAGAACTTGACATAACAAAAGATGCGGTGAAGCAGTTAGTGAATTCCAAGCCCAGATCCCACCACAGTACTAGTCCCACTTCTTCAGAGCTCGATCACTTCATGGAAGCATATTGCATGGCACTGAATAAGCTGAAGGAAGCAATAGAGGAACCAACAAGAGAAACAAAGGCTTTCATAAATGGAATGTATATAGGTCTCAAGGACCTTACTGACGACAATAATATCCAACCAAATGATCAGCGAGATTAA 408 0.4044 MEAAINGENRNVAEDKETDEQLRLKKMIANHPLYGILIQSHCNCLKVGFGEIEELDITKDAVKQLVNSKPRSHHSTSPTSSELDHFMEAYCMALNKLKEAIEEPTRETKAFINGMYIGLKDLTDDNNIQPNDQRD 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01857 135 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 8 127 - -
Accr10g01857 135 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Accr10g01857 135 Pfam KNOX2 domain 81 123 IPR005541 GO:0003677|GO:0005634
Accr10g01857 135 SMART KNOX1_2 22 64 IPR005540 GO:0003677|GO:0005634
Accr10g01857 135 SMART KNOX2_2 73 124 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01857 Accr-Chr10 43072322 43073174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01857 3 122 Homeobox Transcription Factor Family AT1G23380 32.824 2.95e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01857 - - pcin:129321621 132.494