Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01856 ATGGAAGCTGCCATTAATGGTGAAAACAGAAATGTTGCAGAAGACAAAGAAACTGATGAACAACTTCGTCTCAAGAAGATGATTGCTAACCATCCTTTGTATGGCATTTTGATCCAGTCTCACTGCAACTGTTTGAAGCAGGTGGGATTTGGTGAAATTGAAGAACTTGACATAACAAAAGATGCGGTGAAGCAGTTAGTGAATTCCAAGCCCAGATCCCACCACAGTACTAGTCCCACTTCTTCAGAGCTCGATCACTTCATGGAAGCATATTGCATGGCACTGAATAAGCTGAAGGAAGCAATAGAGGAACCAACAAGAGAAACAAAGGCTTTCATAAATGGAATGTATATAGGTCTCAAGGACCTTACTGACGACAATAATATCCAACCAAATGATCAGCGAGATTAA 411 0.4063 MEAAINGENRNVAEDKETDEQLRLKKMIANHPLYGILIQSHCNCLKQVGFGEIEELDITKDAVKQLVNSKPRSHHSTSPTSSELDHFMEAYCMALNKLKEAIEEPTRETKAFINGMYIGLKDLTDDNNIQPNDQRD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01856 136 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 8 128 - -
Accr10g01856 136 Pfam KNOX2 domain 82 124 IPR005541 GO:0003677|GO:0005634
Accr10g01856 136 SMART KNOX2_2 74 125 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01856 Accr-Chr10 43072322 43073174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01856 3 123 Homeobox Transcription Factor Family AT1G23380 34.351 2.98e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01856 - - pcin:129321621 127.872