Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01855 ATGGTTTCAAGATCTTACTCAAATCTATTGGACTTAGCCTCTGGTGACTCTCCATCATTTGGGTTTATGAACCGTGGGATTCCCAGGATTATGACAGTGGCTGGTTTGATTTCTGAGGTTGATGACGACCCAGTGGAGAGTGTGAACTCTGATCCCTCGTCGTCGGTCCACCGTGAACGGATCATAATAGCGGCCAACCAGCTTCCAATCAGGGCTCAGAAAAAGCAAGATGGTAGTACTAGTAATAGTGGTGGCGGTGGTACTAGGAATTGGTTGTTTCAGTGGGATGAGAACTCACTTCTTCTTCAGTTGAAAGATGGATTAGGTGATGATGATATTGAAGTTATTTATGTTGGGTGTCTCAAGGAAGAAATCCACCCAAATGAACAAGATGAGGTCTCACAATTCCTCCTTGAAAATTACCGATGTGTTCCTACCTTTCTTCCTTCTGATCTGTTTTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTTTGTTTCACTATATGTTGCCTCTATCACCAGAACTCGGTGGTAGATTCAATAGGTCACTCTGGCAGGCTTATGTATCTGTGAATAAGATTTTTGCTGATCGTATTATGGAAGTGATTAACCCTGAAGACGATTATGTTTGGATCCACGATTATCATCTAATGGTGCTTCCTACATTCTTGAGGAAGAGATTTAACAGAGTGAAACTTGGGTTTTTCCTCCATAGCCCATTCCCTTCTTCAGAAATTTACAAGACATTGCCCATTAGAGAAGAACTACTGAGAGCTCTTTTGAATTCAGATTTGATAGGCTTCCACACATTTGATTATGCACGCCATTTCCTGTCCTGTTGTAGCCGGATGCTTGGCCTTAGCTACGAATCGAAGCGGGGTTATATTGGGCTTGAGTATTATGGTAGGACTGTTAGCATCAAAATTCTTCCTGTTGGTATCCACATGGGTCAGCTTCAACATGTGTTAAGCCTTACTAAGACAGAAGAGAAAGTTGCTGAGCTCATTCAGCAATTTTCAGGCAGAGGAAGGACATTGATGCTTGGAGTTGATGATATGGATATCTTTAAGGGTATAAGTTTGAAGCTTTTGGCAATGGAACAGCTTCTTATACAACATCCAGAGTGGCAAGGGAAGGTTGTATTGGTCCAAATTGCGAACCCAGCCCGGGGCAAAGGGAAAGATGTGAAGGAAGTGCAAGCAGAGACAAAGGCAACAGTTAAAAGGATTAATGAAACATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTCAAGTTCTATGAGAAAGTTGCATACTATACTGTGGCTGAGTGTTGTCTAGTCACTGCAGTTAGGGATGGAATGAATCTAATACCGTATGAATACATAATTAGTCGTCAAGGAAATGAAAAATTGGATAAAGTTTTGGGACTATGTTCCTCTCCTAAAAAGAGCATGTTAGTTGTCTCTGAGTTCATAGGTTGTTCCCCATCGTTAAGTGGAGCAATCAGAGTGAATCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCACGAGAAGCATTATAGATATGTTAGTACCCATGATGTTGGTTACTGGGCTCGAAGCTTCTTGCAGGATTTGGAAAGGACTTGTAGTGATCATGTCCGGCGAAGGTGGTGGGGAATCGGGTTTGGATTGGGTTTTAGAGTTGTGGCACTTGATCCAAACTTCAGGAAGCTGTCAATGGAGCACATAGTTTCAGCCTACAAGCGAACAAAAACTCGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAAGCTTCCATTGACAAGAGTCCAACAAGTAAAACTATTGAAATTCTTAGTAGCTTGTGTAGAGACAAGAACAGCATGGTGTTTCTTGTTAGTGCTAGGAGCCGCAAAACACTTTCTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCCGCTGAGCATGGCTACTTTCTAAGACTGAAGCGTGATGCAGAATGGGAAACATGTGGACCAGCAACAGACTGTAGCTGGAAACAGATTGCTGAGCCTGTGATGAAGCTTTATACTGAAACAACTGATGGATCCACTATTGAAGATAAAGAGACTGCACTTGTGTGGTGCTATGAGGATGCTGATCCAGATTTCGGGTCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAGAGTGTGCTTGCAAATGAACCTGTCACTGTCAAGAGTGGCCAGAACATTGTAGAGGTTAAGCCACAGGGGGTAAGTAAAGGGATAGTGGTGAAGCGCTTGCTTTCGACCATGCTAGAGAATGAGATATCACCCGATTTTGTGTTGTGCATAGGAGATGATAGGTCTGATGAAGACATGTTTGAGGTAATCTCCAGTTCCATGGCTGGTCCCACCCTAGCAGATAGGGCCGAGGTATTTGCATGCACAGTTGGCCGGAAACCAAGCAAAGCCAAGTATTATCTGGATGACACAGCTGAGATAGTGAGACTGATGCAGGGATTGGCCTCTGTTTCTGAACAAACAGTTCTGATTTAA 2586 0.4327 MVSRSYSNLLDLASGDSPSFGFMNRGIPRIMTVAGLISEVDDDPVESVNSDPSSSVHRERIIIAANQLPIRAQKKQDGSTSNSGGGGTRNWLFQWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHPNEQDEVSQFLLENYRCVPTFLPSDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQHVLSLTKTEEKVAELIQQFSGRGRTLMLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYEKVAYYTVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLCSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLGFRVVALDPNFRKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSKTIEILSSLCRDKNSMVFLVSARSRKTLSEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGIVVKRLLSTMLENEISPDFVLCIGDDRSDEDMFEVISSSMAGPTLADRAEVFACTVGRKPSKAKYYLDDTAEIVRLMQGLASVSEQTVLI 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01855 861 NCBIfam HAD-IIB family hydrolase 606 807 IPR006379 -
Accr10g01855 861 SUPERFAMILY HAD-like 604 851 IPR036412 -
Accr10g01855 861 Gene3D - 736 859 IPR023214 -
Accr10g01855 861 Gene3D - 603 735 IPR023214 -
Accr10g01855 861 FunFam Trehalose-6-phosphate synthase 10 734 861 - -
Accr10g01855 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 323 - -
Accr10g01855 861 Pfam Trehalose-phosphatase 607 841 IPR003337 GO:0003824|GO:0005992
Accr10g01855 861 CDD GT20_TPS 60 557 IPR001830 GO:0003824|GO:0005992
Accr10g01855 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 560 - -
Accr10g01855 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 852 IPR001830 GO:0003824|GO:0005992
Accr10g01855 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 603 720 - -
Accr10g01855 861 Gene3D Glycogen Phosphorylase B; 53 324 - -
Accr10g01855 861 NCBIfam trehalose-phosphatase 602 851 IPR003337 GO:0003824|GO:0005992
Accr10g01855 861 Pfam Glycosyltransferase family 20 62 557 IPR001830 GO:0003824|GO:0005992
Accr10g01855 861 Gene3D Glycogen Phosphorylase B; 325 541 - -
Accr10g01855 861 FunFam Alpha,alpha-trehalose-phosphate synthase 325 541 - -
Accr10g01855 861 CDD HAD_TPP 605 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01855 Accr-Chr10 43050214 43053739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01855 1 857 Trehalose Biosynthesis Gene Families AT1G68020 81.555 0.0 1463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01855 K16055 - cave:132176996 1515.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01855 10 43050214 43053739 Accr10g01855 10 43050214 43053739 ECH