Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01849 ATGGCTGCTTTGCAGAGAGTGACACAGTCAAGCATGACTACTTGTGTAAGCAACTATGGCACCTGCAAAGGTGGTGGTGGTGCAGCTATTGAGAAGGCGGTTCCTGATCAGTTCCCAGCTGGTCTGAGAGTTCTAGTTGTGGACGATGACATCATGACTTTGAAAATCATTGAACAAATGTCTCTCAAGTGTCATTATCGCGTGATGTCTGCTGATGGAAGAACAAGTGCTGTGATGAAGGGTATTAGACATGGGGCTTGTGACTATTTGATCAAGCCTGTTCGTGAGGAGGAATTGAGGAATATATGGCAGCACGTTGTTAGGAAAATGTGGAATGAAAACAAAGAACATGAAAATTCTGGCAGTGTGGAAGATAATGATAGGAATAAACAAGGAAATGATGATACTGAATATGCTTCGTCTGTAATTGATGCGGCAGAAGTAGTTAAAGTGCCTAAAAAGAGGATCAGTTCTAAAGAAGATGATGATGGTGAACTGGAGAACGAAGATCCATCCACATCTAAGAAGCCCCGTGTGGTTTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCCGTGAACCAACTTGGGCTTGATAAGGCTGTACCAAAGAGAATTCTTGAACTGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCTAGTCATCTGCAGAAATTTAGGCTTTATTTGAAGAGAATAAGTGGAGTGGCACAGCAGCAGAATGGGATTCCAAACACAGCCTCCGGGTCTACGGAATCCAGGCTAGGAGGACTTGGAAGGTTAGACATCCAAGCTCTGGCTGCCACTGGCCAAGTTCCTCCTCAAACATTAGCAGTTCTTCATGCAGAACTATTAGGTCGTCCAGCCATGGACCAGACGGCTCTTCTACAATCTTCCATACAGGGCCCCAAACATTCCCCTGCGGAACATGCTGTTGCATATTGTCAGCCTCAGCCTTTAGTAAAATGCCCTTCCAACATTGCCAAGAATTTTCCTCAATCCATCCTTACTGTGGATGACGCTCCTTCAGGCTATGGAGCATGGCCACCATCTGATACGATTGGTTCAATGGGATCCAATGGTAATCATGGAAGGGTGAGTGTTCAAAATAATAACATGCTGATGGATGTACTGCAGCACCAGCAAAGGCAGCAGTTCCAGCAAACACCACAGCATAAGCTGCAGCAGCAATCGCTCATGCACGATCAAAGTCGTTCAATCAATGTTCAACCATCTTGCTTGGTGGCTCCTTCTCAAACTTCAGGCACTTTCCAGGTTAACGGTCCTGCTTCTGTCAACCAGAATTCCAGTTTGACTAGGAATGCCCTTACGGACTATAGTCTCTTTGCATCCCAATCAAGTCATCCTTCATTAAATATTGCTCAATTTCCTGGTGAGGACACCAAAGCTAAAGGTGTTCTTTGTGGATATGTTGCTCCAGGCTCCATCTCGCATTCAGTAAGTGCTAACAATAGCAATACCCAACAGCTTCACAAGTCATCTTTGGCATTCGGCGCCGTGAGAGCTTGGCCAACTCTTTCACCAACCGTGTCTGATATACAAGTTCCGTATGGTGTTTCTAAATCAGGTGATCCAATTGATCAAGTTCATGTAAGGAATCTTGGATTTGTTGGGCAAGGTAGCAGTATTCCGAGTCGGTTTGCTGCTCATGAAATTGAATCACCTGTCAGTGACTTAAGTCAGGGAAAAATCCCTCTAGATAGCAATGGGAACTCAGTGAAGCAGGAGCCAAGTATGGATTTTATGGATAACTCAAAAGTGGGTGCCCCCATCTTACAGAGATATCCATCTGATCCCATGAATGTGTTCACTGAATAG 1842 0.4468 MAALQRVTQSSMTTCVSNYGTCKGGGGAAIEKAVPDQFPAGLRVLVVDDDIMTLKIIEQMSLKCHYRVMSADGRTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKMWNENKEHENSGSVEDNDRNKQGNDDTEYASSVIDAAEVVKVPKKRISSKEDDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRISGVAQQQNGIPNTASGSTESRLGGLGRLDIQALAATGQVPPQTLAVLHAELLGRPAMDQTALLQSSIQGPKHSPAEHAVAYCQPQPLVKCPSNIAKNFPQSILTVDDAPSGYGAWPPSDTIGSMGSNGNHGRVSVQNNNMLMDVLQHQQRQQFQQTPQHKLQQQSLMHDQSRSINVQPSCLVAPSQTSGTFQVNGPASVNQNSSLTRNALTDYSLFASQSSHPSLNIAQFPGEDTKAKGVLCGYVAPGSISHSVSANNSNTQQLHKSSLAFGAVRAWPTLSPTVSDIQVPYGVSKSGDPIDQVHVRNLGFVGQGSSIPSRFAAHEIESPVSDLSQGKIPLDSNGNSVKQEPSMDFMDNSKVGAPILQRYPSDPMNVFTE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01849 613 SUPERFAMILY CheY-like 41 115 IPR011006 -
Accr10g01849 613 Gene3D - 68 155 - -
Accr10g01849 613 SUPERFAMILY Homeodomain-like 173 233 IPR009057 -
Accr10g01849 613 FunFam Two-component response regulator 172 235 - -
Accr10g01849 613 Gene3D - 172 235 - -
Accr10g01849 613 MobiDBLite consensus disorder prediction 153 175 - -
Accr10g01849 613 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 232 IPR017930 -
Accr10g01849 613 MobiDBLite consensus disorder prediction 114 134 - -
Accr10g01849 613 MobiDBLite consensus disorder prediction 566 587 - -
Accr10g01849 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 136 432 IPR044841 GO:0003700|GO:0006355
Accr10g01849 613 MobiDBLite consensus disorder prediction 569 587 - -
Accr10g01849 613 NCBIfam myb-like DNA-binding domain, SHAQKYF class 176 229 IPR006447 GO:0003677
Accr10g01849 613 ProSiteProfiles Response regulatory domain profile. 1 107 IPR001789 GO:0000160
Accr10g01849 613 MobiDBLite consensus disorder prediction 114 137 - -
Accr10g01849 613 Pfam Myb-like DNA-binding domain 178 226 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01849 Accr-Chr10 42959365 42963341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01849 41 291 Response Regulator Gene Family AT3G16857 48.913 9.82e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr10g01849 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01849 - K14491 pcin:129311779 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01849 10 42959365 42963341 Accr10g01849 10 42959365 42963341 ECH