Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01843 ATGGCGATGGCGAGGGAGGTACAGGAGGAAGGAGAGGTACGGAACAACGCCGGGAAGAGGCTTAAATGTATGAAGAAGGAAGACAAGGGAAAAACAGAGGAGGAAGCTGCGGAGGATGAAAGTGAGCTTCCTCTCAGGCCTGGCCTCTTCTATTATCCAACCACTCCTACGTCTTTCGTTGTTTCCGATGCTCTTGAACCCGATTTTCCCATCATCTATGTCAACAAGGTCTTTGAATTCGTCACCGGCTATCGTGCCGATGAGGTTTTGGGTCGCAACTGTCGGTTCTTACAGTATAGGGACCCTCATGCTCAAAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATCAGAAGATGTCTTGAGGAAGGTATCGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGCATTCCTTTAGTGAACAGGCTGAGACTTACTCCAATTCATGATGATGATGGAACTATGACACATGTAATATGCATCCAGCTATTTTCTGAAGCAAATGTTGATCTAAAATGTGTCTCATATCCGGTGTTCAAGGAGACCTGCAGTCAGGAAATTGATAACACTGGTAAAAATTCTCTTAAGAATGGTCAACTAATATACAGCCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAGGTCTTGGCTCATAACATCTTATCACGCCTGACACCAAGGGATGTTGCCTCAATTGGGTCTGTGTGCAGAAGGATCCGTCAATTAACACAGAATGAGCATGTTAGAAAGATGGTGTGTCAAAATGCATGGGGAAAAGAAGTGACTGGTGTATTGGAACTGATGACCAAGAAGTTAGGGTGGGGTCGTCTTAGCCGAGAACTAACCACTCTCGAGGCTGTTTGTTGGAGAAAACTGACAGTTGGAGGTGCAGTAGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAATCGCCTCGTATTGTTTGGAGGTGAGGGAGTTGATATGCAGCCTATGGACGACACTTTTGTCCTCAATCTTGATGCTAAAAATCCTGAGTGGCGAAGGATTAGTGTGAAATCATCCCCACCAGGAAGGTGGGGCCATACACTCTCATGCTTAAATGGCTCTTGGTTGGTGGTATTTGGAGGATGTGGTAGAGAAGGATTGCTTAATGACGTGTTTGTTCTTGATTTGGATGCTCAACAGCCAACATGGAAAGAAGTCTGTGGCAGAACTCCGCCTCTCCCTAGATCTTGGCACAGCTCTTGCACTCTTGAAGGGTCTAAATTGGTAGTCTCAGGTGGATGCACGGACGCTGGGGTGCTTCTTAGTGACACATACCTACTGGACCTTACTACAGATAATCCAACATGGAGAGAAATTCCAACTTGGGCTCCTCCTTCTCGGTTGGGGCACTCACTCTCTGTGTATGGCAGGACAAAAATTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTGCGATTACGATCAGGTGAGGCTTATACGATTGATTTGGAAGACGAAGAGCCTCAGTGGAGGCAGCTAGAATGTAGTGCATTCTCTGGAATAGGTGGTCAAAGTGCTGTGGTTCCTCCACCTCGGCTAGATCATGTCGCAGTGAGCATGCCTTGTGGGAGGATTATTATTTTCGGAGGCTCCATTGCAGGGCTTCATTCTCCATCGCAACTCTTTCTTTTGGACCCATCCGAGGAGAAACCATCATGGAGGATCCTCAACGTGCCAGGGCAACCGCCAAAATTTGCTTGGGGTCACAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTTTTGGGTGGACATACAGGGGAGGAGTGGATACTTAATGAGTTGCATGAGTTATGCTTAGCAAGCAGGCAGGACTCCGACCTAAGGTGA 1887 0.4743 MAMAREVQEEGEVRNNAGKRLKCMKKEDKGKTEEEAAEDESELPLRPGLFYYPTTPTSFVVSDALEPDFPIIYVNKVFEFVTGYRADEVLGRNCRFLQYRDPHAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGIPLVNRLRLTPIHDDDGTMTHVICIQLFSEANVDLKCVSYPVFKETCSQEIDNTGKNSLKNGQLIYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTQNEHVRKMVCQNAWGKEVTGVLELMTKKLGWGRLSRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDAQQPTWKEVCGRTPPLPRSWHSSCTLEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLECSAFSGIGGQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDLR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01843 628 SUPERFAMILY Kelch motif 526 617 IPR015915 GO:0005515
Accr10g01843 628 Gene3D - 208 259 - -
Accr10g01843 628 Gene3D - 285 505 IPR015915 GO:0005515
Accr10g01843 628 FunFam Putative LOV domain-containing protein 491 623 - -
Accr10g01843 628 Pfam Galactose oxidase, central domain 309 359 - -
Accr10g01843 628 CDD PAS 55 165 IPR000014 -
Accr10g01843 628 Gene3D - 506 626 IPR015915 GO:0005515
Accr10g01843 628 MobiDBLite consensus disorder prediction 1 41 - -
Accr10g01843 628 SUPERFAMILY F-box domain 209 289 IPR036047 GO:0005515
Accr10g01843 628 ProSiteProfiles PAS repeat profile. 71 102 IPR000014 -
Accr10g01843 628 SUPERFAMILY PYP-like sensor domain (PAS domain) 66 166 IPR035965 -
Accr10g01843 628 Pfam PAS domain 65 165 IPR000014 -
Accr10g01843 628 Gene3D PAS domain 52 177 - -
Accr10g01843 628 Pfam Kelch motif 532 579 IPR011498 GO:0005515
Accr10g01843 628 FunFam Adagio protein 1 49 177 - -
Accr10g01843 628 CDD F-box_AtADO-like 214 260 - -
Accr10g01843 628 MobiDBLite consensus disorder prediction 7 33 - -
Accr10g01843 628 NCBIfam PAS domain S-box protein 70 165 IPR000014 -
Accr10g01843 628 Pfam Galactose oxidase, central domain 374 420 - -
Accr10g01843 628 Pfam Galactose oxidase, central domain 423 473 - -
Accr10g01843 628 SUPERFAMILY Kelch motif 295 513 IPR015915 GO:0005515
Accr10g01843 628 Pfam F-box domain 215 252 IPR001810 GO:0005515
Accr10g01843 628 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 36 621 - -
Accr10g01843 628 FunFam Putative LOV domain-containing protein 286 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01843 Accr-Chr10 42941302 42945111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01843 54 167 AGC Kinase Gene Family AT5G58140 42.982 5.69e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01843 K12116 - gmx:100301889 1145.57