Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01835 ATGGTTGCTATCCATTTCTTCAAGATTATTCTTGAACATTCTCTTCAAGAAGGAAGGCTTAAAATACCAGACAACTTTACCCGAAAATATGGAGGTACCATGCAAAATCCAGTATATCTGAAGCCTCCCGATGGGACTGAATGGGAAATTCATTGGACAAAATATGAAAGTGGTGAGGTTTGGTTTGAGAAGGGTTGGGATGAAGTTGTTGGATACTACTCTTTAGGTCATGGCCATTTGGTGCTGTTCAAATATGAGGAAACAAGAAGAACTAGTCACTTTAAAGTGAAGATTTTTGACAAGAGTGCATTAGAAATAGACTACCCTCTTCACAGAAGCCTCCCACAAATTAATGATGATTCTGTTTCAATTGAAATCTTGCATGAGAAACCTCCTCTGCATAAAGTAGCCAGCCCAAAACCGCCATTATTATCATCATCTTCATTTCGCCCTTACAAGAAAATTAGAGCTGAAGAAGCTGAAAGGACTTATAATCAGCAAAAGAAGCATTCAAATGGGAACAAGCTTAAGCCCATTAAAGCAGGACCGAATCTTGTCAAGATTGAATCAGAAGGACTCGTAGGCAAAAGCAATTTTTCCACTAAAAAAATTCCAAAATCCATGGCTATCAAAAAAGGAAAGGAGAGACCACTAACTTGTGATGAGAAGAAAAGAGCTTTACAGAGAGTCAACACTTTCACAGCCAAAAATCCCTATTTCAAAATTGTCATGCAGCCAGCATACATCAATAACCGTCTGTGTGTACCAGCAAGTTTTGTTAAACAGAATTTGAAGCAGAAGGGTGAGATTGCTGTCCTCCTTCAGGTTTCGGATGGCAGAACTTGGCGTGTGAAGGGCTATAGGGAAGAAAGAGATCTTAACAAGTTCAGCCTCCAAAGTGGGTGGCTCTCTTTTGTACTAGACAATAACTTGAAAGTGGGTGATGTGTGTGTTTTTGTACTCACAAACCCCACGGCCATTTCCTTCCTAGTTCATGTTTTTGGAGGCTCTGCTGATCCATATGGCTAA 1029 0.3994 MVAIHFFKIILEHSLQEGRLKIPDNFTRKYGGTMQNPVYLKPPDGTEWEIHWTKYESGEVWFEKGWDEVVGYYSLGHGHLVLFKYEETRRTSHFKVKIFDKSALEIDYPLHRSLPQINDDSVSIEILHEKPPLHKVASPKPPLLSSSSFRPYKKIRAEEAERTYNQQKKHSNGNKLKPIKAGPNLVKIESEGLVGKSNFSTKKIPKSMAIKKGKERPLTCDEKKRALQRVNTFTAKNPYFKIVMQPAYINNRLCVPASFVKQNLKQKGEIAVLLQVSDGRTWRVKGYREERDLNKFSLQSGWLSFVLDNNLKVGDVCVFVLTNPTAISFLVHVFGGSADPYG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01835 342 PANTHER B3 DOMAIN-CONTAINING 4 324 - -
Accr10g01835 342 CDD B3_DNA 5 100 IPR003340 GO:0003677
Accr10g01835 342 SUPERFAMILY DNA-binding pseudobarrel domain 5 102 IPR015300 -
Accr10g01835 342 SUPERFAMILY DNA-binding pseudobarrel domain 234 335 IPR015300 -
Accr10g01835 342 ProSiteProfiles B3 DNA-binding domain profile. 238 337 IPR003340 GO:0003677
Accr10g01835 342 CDD B3_DNA 238 334 IPR003340 GO:0003677
Accr10g01835 342 Pfam B3 DNA binding domain 240 334 IPR003340 GO:0003677
Accr10g01835 342 Pfam B3 DNA binding domain 7 101 IPR003340 GO:0003677
Accr10g01835 342 ProSiteProfiles B3 DNA-binding domain profile. 5 102 IPR003340 GO:0003677
Accr10g01835 342 MobiDBLite consensus disorder prediction 161 180 - -
Accr10g01835 342 Gene3D - 218 336 IPR015300 -
Accr10g01835 342 SMART B3_2 6 102 IPR003340 GO:0003677
Accr10g01835 342 SMART B3_2 239 337 IPR003340 GO:0003677
Accr10g01835 342 Gene3D - 2 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01835 Accr-Chr10 42849109 42850667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01835 238 337 B3 DNA Binding Superfamily AT3G18990 34.653 8.08e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr10g01835 B3 5.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01835 - - pcin:129311873 476.092