Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01824 ATGTCTATTTTCTCTTTTCCTCTTCTGTTACTCACATCCTTCATAACCCCATCGTCTTCGGCCACCGAGGCGGCTTACATCTATAGCCGTTGCTCTCAGGCTAAGTTCACGCAGGGCTCTGCCTACGAGTCTGGCGTCAACTCTCTCCTCACCTCCATTGTCAACGCCGCCATGTTCTGCTCCTACAACAACCTCACCGTCCTTGCCTCCTCCTCCTCCTCATCATCATCACAGGACATACCTATCTACGGCCTCTTCCAGTGCCGCGGCGACCTTGCCACCGCCGACTGCTCCCACTGCGTCGCCCAAGCCGTTTCCCAGCTTGGCACCATTTGCCCTGACTTCACCGGCGGAGCCTTGCAGCTCGACGGTTGTTTTGTTAGGTATGATGATTCTGAGTTCTTGGGCGGGGAGGACAACAGTTTGGTCCTGAAGAAATGTGGGCTTCCGGATGGGTTTAATTTTGATGTGTTGACTCAAAGAGATGCTGTGTTGGAGTATTTGGAAACATCCGATGGACTGTATAAGATGTTCAGAACAACTGGTTCGGGCAATTTGCAGGGTATGGCGCAGTGTGTGGGGGATTTGAGTGCCATTGAGTGCCAAGATTGTCTTTCGAATGCGATCGGACGGCTCAGAGTAGAGTGTGGGCCCGTCCAATGGGGACAGATATACTTGGCCAAGTGCTACGCCCGCTATTCCGAAGATGGATATGACTCGCCCGATGAAAACGGTAAGCATAAAAACAAGAAAAAGAAAAAGAAAAAGAAACTTCTGAAGAAAATTGCAAAAATAGTTGGACCCACAGCAGCAACAGTAGCAGGAGGGGGAGCAACGGCTCTACTCACCATATACATTACCAAGAAGTTCCAAAAGAGAAAAGACTCTGGTGGTTCCGCATCCGATGCAGGGGAGACGCCTGGTGTTACTCCGACCTCTGATGGTGTTAAGGTGATTGTTCGTGACCCAATTGTTGTTCGTGTTGTATCCGATGGTTCTCCTGGTGATCAAGATGGCGGTGGTTCTTATATCAAAACACAAAACAAAACAGGGGGCGGTGGTTCGAGCTCCGGGCCCAACAAAGGAGGAAATGGTGATCGAGATGATGTCCCGGATTTTCCCGTTCATTGGGATTATTTTCGCTTTCCTTGGGATTGTCCCTTTCCTTGTGATTGGCACTGTTCACAATTTCATTAG 1197 0.4987 MSIFSFPLLLLTSFITPSSSATEAAYIYSRCSQAKFTQGSAYESGVNSLLTSIVNAAMFCSYNNLTVLASSSSSSSSQDIPIYGLFQCRGDLATADCSHCVAQAVSQLGTICPDFTGGALQLDGCFVRYDDSEFLGGEDNSLVLKKCGLPDGFNFDVLTQRDAVLEYLETSDGLYKMFRTTGSGNLQGMAQCVGDLSAIECQDCLSNAIGRLRVECGPVQWGQIYLAKCYARYSEDGYDSPDENGKHKNKKKKKKKKLLKKIAKIVGPTAATVAGGGATALLTIYITKKFQKRKDSGGSASDAGETPGVTPTSDGVKVIVRDPIVVRVVSDGSPGDQDGGGSYIKTQNKTGGGGSSSGPNKGGNGDRDDVPDFPVHWDYFRFPWDCPFPCDWHCSQFH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01824 398 MobiDBLite consensus disorder prediction 340 362 - -
Accr10g01824 398 MobiDBLite consensus disorder prediction 294 315 - -
Accr10g01824 398 ProSiteProfiles Gnk2-homologous domain profile. 24 134 IPR002902 -
Accr10g01824 398 Pfam Salt stress response/antifungal 31 131 IPR002902 -
Accr10g01824 398 Pfam Salt stress response/antifungal 176 235 IPR002902 -
Accr10g01824 398 ProSiteProfiles Gnk2-homologous domain profile. 135 238 IPR002902 -
Accr10g01824 398 FunFam cysteine-rich repeat secretory protein 3 23 134 - -
Accr10g01824 398 MobiDBLite consensus disorder prediction 329 369 - -
Accr10g01824 398 Gene3D - 153 237 IPR038408 -
Accr10g01824 398 Gene3D - 22 134 IPR038408 -
Accr10g01824 398 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01824 Accr-Chr10 42708621 42712011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01824 9 233 Pollen Coat Proteome AT4G20670 26.400 1.43e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01824 - - tcc:18609859 294.278