Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01818 ATGGCGGAAGTTGCAGAGCCCAAAGCAGTGGCTGAGGCAAAGAAGAAGAAGGAGCAGAGTTTACCCTTTTATCAGCTATCCTCTTTTGCAGATAAGTATGACTGGTTGTTCATGATCTCTGGGAGCTTGGGAGCGATCGTTCATGGCTCCTCCATGCTTGTTTTATTTCTTCTTTTCGGTGAATTGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAAATGACTGAAGAAGTATCAAAGTATGCTTTGTATTTTGTGTACCAGGGTCTTGTCGTTTACATTTCATCGTATGCGGAAATTGCTTGTTGGATGTACACTGGGGAGAGGAAAGTGAGCACGTTGAGGAAGAAATATTTGGAGGCAGTGCTTATACAGGACGTTGGGTTCTTCGACATAGACGCTAGAACAGGGGATATTGTTTTTAGTGTCTCCACTGATACTCGACTTGTTCAAGATGCTATAAGCGAGAAGGTAGGGAACTTCATACACTATCTCACCACAAGGGTTCGAAGAATGATGCTTGCTGCAATATTGAGGAATGAAAATCTCACCACATCACTTCTTCATTATCTTTAG 582 0.4244 MAEVAEPKAVAEAKKKKEQSLPFYQLSSFADKYDWLFMISGSLGAIVHGSSMLVLFLLFGELVNGFGKNQMDLKKMTEEVSKYALYFVYQGLVVYISSYAEIACWMYTGERKVSTLRKKYLEAVLIQDVGFFDIDARTGDIVFSVSTDTRLVQDAISEKVGNFIHYLTTRVRRMMLAAILRNENLTTSLLHYL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01818 193 Pfam ABC transporter transmembrane region 43 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr10g01818 193 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr10g01818 193 SUPERFAMILY ABC transporter transmembrane region 26 169 IPR036640 GO:0005524|GO:0016020
Accr10g01818 193 PANTHER ABC TRANSPORTER B FAMILY 6 186 IPR039421 -
Accr10g01818 193 Gene3D ABC transporter type 1, transmembrane domain 16 183 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01818 Accr-Chr10 42496613 42497194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01818 2 171 Calmodulin-binding Proteins AT2G36910 50.877 3.81e-54 183