Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01815 ATGGAGATGGATTTCTTGGGTCTAAGCTCAAAAGAACCATTAGCTATGGTGAAGGAGGAGATTAACAATGATGGATGCAAAGATTCAGGCTTCACTAAGGGTTCAGCTGCACAATGGCCCTTCTCCAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGATGATGGGGTCTGATCCTCTCACATCTGCTGGATTTATGGCTGATGCATTTGATGTTCCTCAAAAACGCTCTGCTTCTGAAATCCAGAAACCTTTCAATCACGATGTGCAAAGTGGTTTTCATTTTTCCCTGGCTCCTTATCCTGTACCAAATGACGTGCTTTCGCTGAATCGTCCTCAAGATGTGAAGATGTTTTCGGCTCCCAATCAAGCAATTCCTGTTTCCATGGGACACCCTTTCTTGAAGAACCATTTCACCACCGGGGGTCAGAATATGGCTGGTAATAATGTGAAGCAACAGCTGCTTGGGTGTATACCTGTTTCCTTGCCTCATTTAGTACCCACTACCATCAGTTCTGTTCCTGCAATGACTGAATCATGTTTGAAGCCATCTGCACCTCCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCACCCCTGAGAAGGCACAAGCTATCATGCTGTTGGCTGCGAATGGGTTACCAGTGACTTCTAACAAGGCACAGCCGAACATTCAGGCACCAAACTCAAAGTTGACTTCTGGTGAAGGTGTCCCTGTGAGTCAACCCATAAATACATTGCCTTGTCCTAGTCTTTCCAGTCCTCTATCTGTGTCTTCACATACGGGTACACAGTCAAGGAGTGGCTCAACCAGCTCTGATGAGCGTCTGGCAGCTAAAACAATCGGAGTTCCCACCACTCCTGTTAGCAAAGTGGAGCCTCCAAAAGTAGTTATCGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGCAAAGCATCATTGGCACGATTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCCGCAGCACCATATAACCTAAGCAAGAAAGCCGAGGATGTTACTAATATCTCTGCAACTACTTCTGCTGCTTCTAGCATTATATCAGCCAAGCAAGCATAG 1137 0.4556 MEMDFLGLSSKEPLAMVKEEINNDGCKDSGFTKGSAAQWPFSNKVSALPHLMSFKVSQDDKTKMMGSDPLTSAGFMADAFDVPQKRSASEIQKPFNHDVQSGFHFSLAPYPVPNDVLSLNRPQDVKMFSAPNQAIPVSMGHPFLKNHFTTGGQNMAGNNVKQQLLGCIPVSLPHLVPTTISSVPAMTESCLKPSAPPSQLTIFYAGTVNVFDDITPEKAQAIMLLAANGLPVTSNKAQPNIQAPNSKLTSGEGVPVSQPINTLPCPSLSSPLSVSSHTGTQSRSGSTSSDERLAAKTIGVPTTPVSKVEPPKVVIATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKAEDVTNISATTSAASSIISAKQA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01815 378 ProSiteProfiles Tify domain profile. 193 228 IPR010399 -
Accr10g01815 378 MobiDBLite consensus disorder prediction 237 293 - -
Accr10g01815 378 Pfam Jas motif 325 350 IPR018467 -
Accr10g01815 378 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 146 357 IPR040390 -
Accr10g01815 378 SMART tify_2 193 228 IPR010399 -
Accr10g01815 378 Pfam tify domain 195 227 IPR010399 -
Accr10g01815 378 MobiDBLite consensus disorder prediction 237 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01815 Accr-Chr10 42468874 42472087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01815 39 356 Tify Gene Family AT3G17860 36.257 1.33e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr10g01815 tify 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01815 K13464 - qsa:O6P43_032516 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01815 10 42468874 42472087 Accr10g01815 10 42468874 42472087 ECH