Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01814 ATGGAGATGGATTTCTTGGGTCTAAGCTCAAAAGAACCATTAGCTATGGTGAAGGAGGAGATTAACAATGATGGATGCAAAGATTCAGGCTTCACTAAGGGTTCAGCTGCACAATGGCCCTTCTCCAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGATGATGGGGTCTGATCCTCTCACATCTGCTGGATTTATGGCTGATGCATTTGATGTTCCTCAAAAACGCTCTGCTTCTGAAATCCAGAAACCTTTCAATCACGATGTGCAAAGTGGTTTTCATTTTTCCCTGGCTCCTTATCCTGTACCAAATGACGTGCTTTCGCTGAATCGTCCTCAAGATGTGAAGATGTTTTCGGCTCCCAATCAAGCAATTCCTGTTTCCATGGGACACCCTTTCTTGAAGAACCATTTCACCACCGGGGGTCAGAATATGGCTGGTAATAATGTGAAGCAACAGCTGCTTGGGTGTATACCTGTTTCCTTGCCTCATTTAGTACCCACTACCATCAGTTCTGTTCCTGCAATGACTGAATCATGTTTGAAGCCATCTGCACCTCCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCACCCCTGAGAAGGCACAAGCTATCATGCTGTTGGCTGCGAATGGGTTACCAGTGACTTCTAACAAGGCACAGCCGAACATTCAGGCACCAAACTCAAAGTTGACTTCTGGTGAAGGTGTCCCTTCAAGGAGTGGCTCAACCAGCTCTGATGAGCGTCTGGCAGCTAAAACAATCGGAGTTCCCACCACTCCTGTTAGCAAAGTGGAGCCTCCAAAAGTAGTTATCGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGCAAAGCATCATTGGCACGATTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCCGCAGCACCATATAACCTAAGCAAGAAAGCCGAGGATGTTACTAATATCTCTGCAACTACTTCTGCTGCTTCTAGCATTATATCAGCCAAGCAAGCATAG 1059 0.4561 MEMDFLGLSSKEPLAMVKEEINNDGCKDSGFTKGSAAQWPFSNKVSALPHLMSFKVSQDDKTKMMGSDPLTSAGFMADAFDVPQKRSASEIQKPFNHDVQSGFHFSLAPYPVPNDVLSLNRPQDVKMFSAPNQAIPVSMGHPFLKNHFTTGGQNMAGNNVKQQLLGCIPVSLPHLVPTTISSVPAMTESCLKPSAPPSQLTIFYAGTVNVFDDITPEKAQAIMLLAANGLPVTSNKAQPNIQAPNSKLTSGEGVPSRSGSTSSDERLAAKTIGVPTTPVSKVEPPKVVIATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKAEDVTNISATTSAASSIISAKQA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01814 352 ProSiteProfiles Tify domain profile. 193 228 IPR010399 -
Accr10g01814 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 146 331 IPR040390 -
Accr10g01814 352 MobiDBLite consensus disorder prediction 235 267 - -
Accr10g01814 352 SMART tify_2 193 228 IPR010399 -
Accr10g01814 352 Pfam Jas motif 299 324 IPR018467 -
Accr10g01814 352 MobiDBLite consensus disorder prediction 235 271 - -
Accr10g01814 352 Pfam tify domain 195 227 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01814 Accr-Chr10 42468874 42472087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01814 39 330 Tify Gene Family AT3G17860 34.940 5.44e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr10g01814 tify 2.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01814 K13464 - qsa:O6P43_032516 410.223