Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01797 ATGACCAGATCTCACAGTTTTCTTCATAATTTGATTAAACCCTTCAAATTCGGTTCTAGTAGAGAGGGAAACAACGAAGAAGAGTTAGAGAGAATTGCTGCCCAAGAGCAAAAAGTCTTTCCCTATGAAACCTTACTTGCTGCTACCAAAAATTTTCATTCTCATCATAAGCTTGGTGAGGGAGGTTTTGGACCCGTCTACAAGGGGACATTGGACGATGGAAGAGAGATTGCGGTAAAGAAGTTATCACAGAGTTCAAATCAAGGGAACAAAGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGTACGGAGAAGCTACTTGTGTATGAGTATGTTCCTCATGAGAGCCTTGACAAACTTTTATTCAAATCTCACAGAAGAGAGCAGCTAGATTGGAAAAGGAGGCTTGACATTATCACAGGCATAGCAAGGGGCTTACTTTATCTTCATGAAGACTCGCATAGCTGCATCATCCACCGAGACATCAAGGCCAGTAATATCTTGCTCGATGACAAATGGATGCCTAAGATTGCAGACTTTGGCATGGCTCGTCTCTTTCCAGAGGACCAAACTCATGTCAATACACGGGTGGCTGGCACCAATGGATATATGGCTCCAGAGTATGTGATGCATGGACATTTATCAGTGAAGGCAGATGTGTATAGCTATGGTGTTTTGGTGCTGGAGTTGATAAGTGGCCAAAGGAATTCAATGTTTAGCCTTGAGATGGATGCACAAAATCTCCTTGATTGGTCATACAAGCTTTACAAGAAAGGGAGGAGCATAGAAATGGTTGACCCTTCATTAGCAGCTTCAGCAGTAGAAGATCAAGTGACAATGTGCATACAGCTGGGTCTGCTGTGTGTTCAGGGGGATCCACAGCTCCGGCCAAGCATGCGACGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGTCACATGGACGAGCCGACTAGACCAGGAGCTCCTGGTTCCAGATACAGAAGATCTCGCAGGCCATCTCCATTTTCTACCGCAGCTGGTACTTCTGGTGCTGACTCTGATTCTAGGACATCAGACTCAAGCAGTAACTATACTGCCACCACAACAACGCCCGCTCCAAGCTCCGCCGCTCGAGAAATTGACAGTCGGGGAAAACGTCCCATGCATGAGGCTTAG 1203 0.4638 MTRSHSFLHNLIKPFKFGSSREGNNEEELERIAAQEQKVFPYETLLAATKNFHSHHKLGEGGFGPVYKGTLDDGREIAVKKLSQSSNQGNKEFMNEAKLLARVQHRNVVNLLGYCVHGTEKLLVYEYVPHESLDKLLFKSHRREQLDWKRRLDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVYSYGVLVLELISGQRNSMFSLEMDAQNLLDWSYKLYKKGRSIEMVDPSLAASAVEDQVTMCIQLGLLCVQGDPQLRPSMRRVVVMLSKKPGHMDEPTRPGAPGSRYRRSRRPSPFSTAAGTSGADSDSRTSDSSSNYTATTTTPAPSSAAREIDSRGKRPMHEA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01797 400 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01797 400 SUPERFAMILY Protein kinase-like (PK-like) 37 334 IPR011009 -
Accr10g01797 400 Pfam Protein tyrosine and serine/threonine kinase 54 321 IPR001245 GO:0004672|GO:0006468
Accr10g01797 400 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Accr10g01797 400 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Accr10g01797 400 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01797 400 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Accr10g01797 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 375 - -
Accr10g01797 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Accr10g01797 400 CDD STKc_IRAK 58 324 - -
Accr10g01797 400 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Accr10g01797 400 MobiDBLite consensus disorder prediction 346 385 - -
Accr10g01797 400 MobiDBLite consensus disorder prediction 322 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01797 Accr-Chr10 42288203 42292077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01797 40 336 Receptor kinase-like Gene Family AT4G11530 52.174 1.29e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr10g01797 PK_Tyr_Ser-Thr 6.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01797 - - zju:107429294 597.045