Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01793 ATGTTTGCCTCAACGATCCTAACATCGTCTAAACTGAAAACTCAGCATTTCGTGTTAGTCCCACCAAACACCAGCATAGAAATCTTCCCAACTGGAAGCAGAAGAACATACCGGAGAATCAGAGTGTCAGCTTATTCTAAATTAGCCCTTCAGAGTTTCCCTCTTTACCTGAAATCGAACATTAGACCTATAGTGGCCACGAGGGTCAGTAATGGCGATGATGGCGCGTTTGATGCTACCTCACAACTATCTTCCCCTCCTCCTTCTGACAACGAAGAAGTGAAGAAGAGTACCTCTTCTGGCCTCGGTGATGGTTATGTGGCCTTGTTTGTTCGCATGTTAGGCTTAGATCATGATCCTCGTGATAGGGAACAGGCTATAATTACTCTGTGGGAATATTCACTTGGCGGAAAGCAGTGTGTTGATACTTTAATGCGATTTCCTGGCTGTCTCAATCTAACTGTGAACCTCCTTAGATCGGATTCTAGTTTAGCATGTGAAGCAGCTGCAGGCCTTTTGAGATCTCTATCTTCAGTCAATCTATACAGGAATTCGGTAGCAGAGAGTGGAGCAATAGAAGAGATAAATAGACTGCTGAGGCAGTCTTCCTTGGCTCCTGAGGTAAAGGAGCAGAGTATGAGTACATTGTGGAATTTATCTGTGGATGAGAAGCTCCGCATTAAACTTGCAAATAGTGATTCCCTACCATTGATTATTAAGTACCTTGAAGACGAGGATGTAAAAGTGAAGGAAGCTGCGGGAGGCATATTGGCAAATTTAGCTTTGAGCCATGTTAACCACAGCCTTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTTATTCTGAAGGATCCAAAGTCATTGAAAAGGAAGCAAAAAATGCGTTGCTGGAATTTGTTAAGGATGAATATTATAAAATTCTTCTTGTTGAGGAAGGTCTGGTTCCTGTGCCACTGATTGGTGCTGAGGCATACAAGTCATTCTCCCCTGATCTGCATTCATGGCCCAAATTTCCAGATGGTACAGAGATTGAACGGCCTTCTCTAAAACCTTCCAGGTATGGTGCATCAGAATTACTTCTTGGACTTAATATCGATGATAAGAGCATTAACATAGAGGAGGCAAAAATTGACGCAATTGAGGGAGAGGCAATGCAACTATTGCTTGTTCTTACTGGAGCTATAGAAGGGGAAGGGGAAGGCACATCTGGTTCTGAAAGCTCTGATAGCCAGCAACTTACACTTTTACCTTGGAAGTATGGGGTTGCTCGCTTGGCACTTATTCTACAACTAGAAGATAAGTCTGCTATAAAAAGGGCTGCAGAGTCAATAGCTGATGTATCTATCAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAAGCATTTAGTTCGGCTTTTGAATTGTGATGATGATGCTGTCAGATTGGCTGTAACTCAAGCTTTGGAGAGGTTGTCCACCAGCAACGGAGTCTGCCAGCTTATTGAATCTGAGGGAGTATTAAGTCCTTTAGTTAACATTCTAAAATGCTCAGAGATATCTGAAACTATTGCAGAAAAGTCTTTGAATACAATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTATGATGGATCAGTTAATGGATCTGGGAAGGCCTCAAGTGGAGTTCGAAATGGTGTTGTTTCAGCTAGCTCTAGTACCACTGAATATCCGATATCAAAGACCACTACCAGGAATGATGTACTTGATTCTGCTTTTGTTGCCCGCCTTGTTGAGATTTTGAAGTCCTCTTCTCCCAGTTTACAAGCAAAAGCTGCATCAATTCTCGAGTTTGTTGCATTGACTGACCCAACTATGGTCTCTACTATATCTGTAGATATTGAATCAGCTCTCGATGAAGTCTTTCAGCAAAAAATTTTGAGAATTTCAGGTGGAGACCCTGATGTAGAAGATCAGGTTTCAGAAGCATACCCGATCGAAGTTGAAGAAGCCGGGCTTGCCATATCAGCAGCATCCCGATTAATGACAAGACTACTCGACTGTCAGCATTTTCGCAACAAAGTGAACCCCTCCCATTTCATCGGCTTGCTCCGAAAAATCCTCAAGTCTTGTATACCTCTCCACACCAAAGAGTGGGTGGCTGCTTGCCTAGTTAAACTCAGCCCTCTCTCCAGTGACAACCCAAATCTTGACCCAATCAATGTGGAAGTTACAGTTTATGAGACAATCCCAAGACTCGTAGAACAGATTAAAACTTCCTCCTCTCTGGAAGCACAGGAATCTGCTGTTGTAGAACTGAACAGAATAATATCTGAAGAAGCGGTTCATTCTGCTAGAGCTATCGTATCAGAGGGAGCAATTTATCCATTGGTGAAGCTGATAGAAGAAGGAAGTGAAAGGGCCATTGAAGCAGGATTGGCTATATTGTATAATCTGAGCATGGACTCTAAGAACCATTCATTGATTGTGGATGCTGGGGCTGTCCCTGTACTGAGAAGGATTGTGCTCTCACAAAGGCCTCAATGGGATAAGGCACTTCATTTACTCAGGAATTTGCCTACTTGA 2583 0.427 MFASTILTSSKLKTQHFVLVPPNTSIEIFPTGSRRTYRRIRVSAYSKLALQSFPLYLKSNIRPIVATRVSNGDDGAFDATSQLSSPPPSDNEEVKKSTSSGLGDGYVALFVRMLGLDHDPRDREQAIITLWEYSLGGKQCVDTLMRFPGCLNLTVNLLRSDSSLACEAAAGLLRSLSSVNLYRNSVAESGAIEEINRLLRQSSLAPEVKEQSMSTLWNLSVDEKLRIKLANSDSLPLIIKYLEDEDVKVKEAAGGILANLALSHVNHSLLVEAGVIPKLAKFLTSYSEGSKVIEKEAKNALLEFVKDEYYKILLVEEGLVPVPLIGAEAYKSFSPDLHSWPKFPDGTEIERPSLKPSRYGASELLLGLNIDDKSINIEEAKIDAIEGEAMQLLLVLTGAIEGEGEGTSGSESSDSQQLTLLPWKYGVARLALILQLEDKSAIKRAAESIADVSINEHMRIAFKEAGAVKHLVRLLNCDDDAVRLAVTQALERLSTSNGVCQLIESEGVLSPLVNILKCSEISETIAEKSLNTIARILDPSKEMKLKFYDGSVNGSGKASSGVRNGVVSASSSTTEYPISKTTTRNDVLDSAFVARLVEILKSSSPSLQAKAASILEFVALTDPTMVSTISVDIESALDEVFQQKILRISGGDPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDCQHFRNKVNPSHFIGLLRKILKSCIPLHTKEWVAACLVKLSPLSSDNPNLDPINVEVTVYETIPRLVEQIKTSSSLEAQESAVVELNRIISEEAVHSARAIVSEGAIYPLVKLIEEGSERAIEAGLAILYNLSMDSKNHSLIVDAGAVPVLRRIVLSQRPQWDKALHLLRNLPT 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01793 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 233 275 IPR000225 GO:0005515
Accr10g01793 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 791 833 IPR000225 GO:0005515
Accr10g01793 860 MobiDBLite consensus disorder prediction 76 99 - -
Accr10g01793 860 Gene3D - 424 639 IPR011989 -
Accr10g01793 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 190 234 IPR000225 GO:0005515
Accr10g01793 860 Gene3D - 667 859 IPR011989 -
Accr10g01793 860 Pfam Armadillo/beta-catenin-like repeat 455 494 IPR000225 GO:0005515
Accr10g01793 860 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 67 860 - -
Accr10g01793 860 Gene3D - 89 327 IPR011989 -
Accr10g01793 860 MobiDBLite consensus disorder prediction 76 98 - -
Accr10g01793 860 SMART arm_5 496 538 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 780 820 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 821 860 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 263 306 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 455 495 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 178 221 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 222 262 IPR000225 GO:0005515
Accr10g01793 860 SMART arm_5 580 620 IPR000225 GO:0005515
Accr10g01793 860 SUPERFAMILY ARM repeat 434 846 IPR016024 -
Accr10g01793 860 SUPERFAMILY ARM repeat 107 538 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01793 105 325 U-box Gene Family AT2G23140 26.222 3.23e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01793 - - pcin:129311654 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01793 10 42225937 42231768 Accr10g01793 10 42225937 42231768 ECH