Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01781 ATGGATAACATCCTGGGTCTTCTCAAACTTCGCATAAAAAAGGGTATTTCTCTAGCAATTCGTGATACTCGTAGCAGTGACCCTTATGTCGTTGTCACTTCGGGCGATCAGAAAGTGAAGACTCGTGTCATTAAGAATAACCGCAACCCTCAGTGGGATGATGAATTGACTCTCTCCGTTAAGGATGTCAACACTCCAATTCATCTCGCAGTTTTTGACCAAGACACATTCAGTGTGGATGACAAAATGGGGGATGCAGAAATAGATATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGGGCAACCTCCCAAATGGTAGTGTAGTAAAAAAAATTCAACCAGATGGGAAAAACTACCTTTCTGAGGAGAGCAGCTGCATATTGAAGAACGGAAAAGTCACGCAAGAAATGACTCTTGCTTTGAGAAATGTGGAATGTGGCCACGTAGTCGTCGAAATTGAGTGGAAGGAAGTTCCAGGCTGCAAGGGCTTATCTGGGATTGAGATCTGA 513 0.4308 MDNILGLLKLRIKKGISLAIRDTRSSDPYVVVTSGDQKVKTRVIKNNRNPQWDDELTLSVKDVNTPIHLAVFDQDTFSVDDKMGDAEIDIKPYLQCLKMNLGNLPNGSVVKKIQPDGKNYLSEESSCILKNGKVTQEMTLALRNVECGHVVVEIEWKEVPGCKGLSGIEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01781 170 SMART C2_3c 7 102 IPR000008 -
Accr10g01781 170 Pfam C2 domain 7 92 IPR000008 -
Accr10g01781 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Accr10g01781 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Accr10g01781 170 Gene3D C2 domain 4 160 IPR035892 -
Accr10g01781 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01781 Accr-Chr10 42025784 42027530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01781 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 9.35e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01781 - - gmx:100792328 248.44