Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01753 ATGACTCTTACAGGTCTGGTTTCGCTTGTGTTCGATTTCATTGGTCTAGTTCCATACAACATCAAACATCAGAAGCAGGGAATTGCAAGTGAATCATCGGCAGAAGCACCGAGGTTGATCGAAGTTGATTGTTGCTGTGTGTGTTTGTCGAGGTTAAAGGAGGAGGAAGAGACAAAGATTCTTCCTTGTTTTCACAGATTCCATAAACTCTGTGTGGATAAATGGCTCAATGTTAATAAGGGTCGCCACAAAACATGTCCTCTCTGTCGGTTCTCAATGGCGACAGAGGATCGGAATAATAAGTCTCTTGATGATTCTTCGGCAGAATTCACTGAGGATATGCTTGATCCTGTTCATATGGAAATTATTTGGCCCCCTAACATGTGCTATTGGTGA 396 0.4242 MTLTGLVSLVFDFIGLVPYNIKHQKQGIASESSAEAPRLIEVDCCCVCLSRLKEEEETKILPCFHRFHKLCVDKWLNVNKGRHKTCPLCRFSMATEDRNNKSLDDSSAEFTEDMLDPVHMEIIWPPNMCYW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01753 131 ProSiteProfiles Zinc finger RING-type profile. 45 90 IPR001841 -
Accr10g01753 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 101 IPR013083 -
Accr10g01753 131 SUPERFAMILY RING/U-box 38 95 - -
Accr10g01753 131 PANTHER TARGET OF ERK KINASE MPK-1 29 96 - -
Accr10g01753 131 SMART ring_2 45 89 IPR001841 -
Accr10g01753 131 Pfam Ring finger domain 44 90 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01753 Accr-Chr10 41674029 41674799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01753 29 96 C3H Transcription Factor Family AT1G26800 41.667 9.35e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01753 - - pcin:129312163 212.231