Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01752 ATGGAGGCTGATATTGATTCAGTAAGTTCCTCGTCATCATCATCTTACTACACCATTCTCGGTGTCGATTCTGATTCTTCTCTTGAAGAAATAAGGCGCGCTTATCGCAGGCTTGCAATGCAATGGCATCCGGATAGGTGGGCAAGAACACCTTCTCTACTGGGAGAAGCAAAACGAAAGTTCCAGCAGATTCAGGAAGCCTATTCAGTATTGTCGGACGAAAGCAAAAGAACGATGTACGATGCAGGCTTGTACGATCCCCAAGAAGAAGAGGACGAGGGGTTATATGAGTTTGTGCAAGAGCTGAAGACGCAAGTGAGCAAAGAGGAGAGGGAATATAGCATAGAGGAGTTGCAGAGCATGCTAATGGAAATGGCTCAAGGATTTGAAGATCCTCCATGGCAATTTAAAGCATCACCAGTGGAAGAGGAAAGCCACTGCTCAAAGAGGGCTCGCCTGGACTCTAACTTGAACATGAATTTGGGGTCACCTTTCTATGAGCCTGGGTTTCGTTTGTATGAAACCAGGGGCTACTGTAATTAG 543 0.4604 MEADIDSVSSSSSSSYYTILGVDSDSSLEEIRRAYRRLAMQWHPDRWARTPSLLGEAKRKFQQIQEAYSVLSDESKRTMYDAGLYDPQEEEDEGLYEFVQELKTQVSKEEREYSIEELQSMLMEMAQGFEDPPWQFKASPVEEESHCSKRARLDSNLNMNLGSPFYEPGFRLYETRGYCN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01752 180 ProSitePatterns Nt-dnaJ domain signature. 61 80 IPR018253 -
Accr10g01752 180 SMART dnaj_3 14 76 IPR001623 -
Accr10g01752 180 Coils Coil 99 119 - -
Accr10g01752 180 SUPERFAMILY Chaperone J-domain 12 87 IPR036869 -
Accr10g01752 180 Pfam DnaJ domain 16 81 IPR001623 -
Accr10g01752 180 ProSiteProfiles dnaJ domain profile. 15 84 IPR001623 -
Accr10g01752 180 CDD DnaJ 16 73 IPR001623 -
Accr10g01752 180 PRINTS DnaJ domain signature 35 50 IPR001623 -
Accr10g01752 180 PRINTS DnaJ domain signature 17 35 IPR001623 -
Accr10g01752 180 PRINTS DnaJ domain signature 56 76 IPR001623 -
Accr10g01752 180 Gene3D DnaJ domain 3 112 IPR036869 -
Accr10g01752 180 PANTHER PUTATIVE, EXPRESSED-RELATED 11 135 - -
Accr10g01752 180 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01752 Accr-Chr10 41668287 41669589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01752 7 82 C2H2 Transcription Factor Family AT1G74250 44.156 2.24e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01752 - - cave:132179194 222.631