Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01738 ATGGAGCAATATCTGTCAAAACAGGGCACACATTATGCTGCCGATGACCATGATCAGGAAAGGATGGAACGCCTTCCTCGTTGCATTGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATACCAACCTGTTGAAATTTGAAGACAAAGTTGGCTCTGGATCATTCGGTGATTTGTACAAAGGCACATATTGCAGTCAAGTTGTGGCTATCAAAGTCCTCAAACCTGAGCTTACAAACACAGATATGTTGAGGGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCGACCACCAAATCCATGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCTTCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATACACAGGGACCTCAAGACCGCCAATCTGCTGATGGATGAGAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGAAGATACAATCTGGAGTGATGACAGCTGAAACTGGAACCTACCGTTGGATGGCTCCAGAGATCATTGAACACAAACCTTATGACCAGAAAGCAGATGTCTTTAGTTTTGGAATAACTCTTTGGGAGCTTTTAACCAGAGAACTGCCTTACTCTTACTTGACTCCATTACAAGCAGCAGTAGGCGTGGTCCAAAAGGGTCTAAGACCTACAATCCCCAAGAGCACACACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCCGAATTCTCCGAAATAATAGAGATTCTTCAGCTGATAGCTAAAGAGGTTGTTGATGAAAAAGCAAATAATCACAAAGATAAATCGCCCCACGGCTTTCTCTCAACATTCAAATGGGGCCATCACTGA 984 0.4217 MEQYLSKQGTHYAADDHDQERMERLPRCIEIPSDGTDVWEINTNLLKFEDKVGSGSFGDLYKGTYCSQVVAIKVLKPELTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTRPPNPCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVKIQSGVMTAETGTYRWMAPEIIEHKPYDQKADVFSFGITLWELLTRELPYSYLTPLQAAVGVVQKGLRPTIPKSTHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIAKEVVDEKANNHKDKSPHGFLSTFKWGHH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01738 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Accr10g01738 327 SUPERFAMILY Protein kinase-like (PK-like) 30 295 IPR011009 -
Accr10g01738 327 FunFam serine/threonine-protein kinase HT1 125 316 - -
Accr10g01738 327 SMART serkin_6 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01738 327 PIRSF ILK 2 316 - -
Accr10g01738 327 ProSitePatterns Protein kinases ATP-binding region signature. 52 73 IPR017441 GO:0005524
Accr10g01738 327 Gene3D Phosphorylase Kinase; domain 1 35 124 - -
Accr10g01738 327 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 305 - -
Accr10g01738 327 CDD STKc_MAP3K-like 52 295 - -
Accr10g01738 327 FunFam Serine/threonine-protein kinase isoform 1 36 124 - -
Accr10g01738 327 ProSiteProfiles Protein kinase domain profile. 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01738 327 Gene3D Transferase(Phosphotransferase) domain 1 125 319 - -
Accr10g01738 327 Pfam Protein tyrosine and serine/threonine kinase 46 295 IPR001245 GO:0004672|GO:0006468
Accr10g01738 327 PRINTS Tyrosine kinase catalytic domain signature 157 175 IPR001245 GO:0004672|GO:0006468
Accr10g01738 327 PRINTS Tyrosine kinase catalytic domain signature 203 213 IPR001245 GO:0004672|GO:0006468
Accr10g01738 327 PRINTS Tyrosine kinase catalytic domain signature 120 133 IPR001245 GO:0004672|GO:0006468
Accr10g01738 327 PRINTS Tyrosine kinase catalytic domain signature 222 244 IPR001245 GO:0004672|GO:0006468
Accr10g01738 327 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01738 Accr-Chr10 41496767 41499776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01738 16 326 MAP Kinase Kinase Kinase AT4G35780 73.955 1.90e-173 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr10g01738 PK_Tyr_Ser-Thr 3.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01738 - - gmx:100816767 558.525