Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01727 ATGGCACGCCCTTCTCCTTGTGCTTCATGCAAGCGGCGACGACGTCGATGTGCCACAGATTGCATCTTTGCTCCTTATTTCCCCTCCGATGATCCTCAAAAGTTTGCCGTTGTCCACAAGGTCTTTGGTACCAGCAATGTCAGAAAAATGTTGCAGGAACTTCCAGTTCATCAGAGAGGATACGCAGTGCGCAGCTTAGTGTATGAAGCGAAAGCTTGGGCAATAGACCGAGTTTATGGCTGTGTTGGGTACATTGCCTCTCTGAAGAATCAGCTTGCTGAGGCTCAGAATCAAGTTTCAGAGCTTCAAAAGCAGCTCGATGTGGCTCAGGCACAAGAACTTGACCTGAATCATGCTGCAAACAAACGTAATTTTGACCTCAACCAACGTCCTTCTCGTGAAGATGGACCATCAGGCCTTAATTAA 426 0.4765 MARPSPCASCKRRRRRCATDCIFAPYFPSDDPQKFAVVHKVFGTSNVRKMLQELPVHQRGYAVRSLVYEAKAWAIDRVYGCVGYIASLKNQLAEAQNQVSELQKQLDVAQAQELDLNHAANKRNFDLNQRPSREDGPSGLN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01727 141 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Accr10g01727 141 MobiDBLite consensus disorder prediction 121 141 - -
Accr10g01727 141 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Accr10g01727 141 Coils Coil 85 112 - -
Accr10g01727 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01727 Accr-Chr10 41423411 41424038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01727 5 114 AS2 family AT2G30130 70.909 2.17e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr10g01727 LOB 7.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01727 - - egt:105977610 140.198