Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01726 ATGGCCCGCCCTTCTCCTTGTGCTTCATGCAAGCGGCGTCGACGCAGATGCGCCGCAGATTGCATCTTTGCTCCTTATTTTCCCTCCGATGATCCTCAAAAGTTTGCCGTCGTCCACAAGGTCTTTGGTGCCTGCAATGTCAGAAAAATGTTGCAGGAACTTCCAGTTCATCAGAGAGGATACGCAGTGTGCAGCTTAGTGTACGAAGCAAAAGCTTGGGCGATAGACCGAGTGTATGGCTGTGTTGGGTACATTTCCTCTCTGAAGAATCAGCTCGCTGCCGCTCAGAATCAAGTTTCAGAGCTTCGAAAGCAGCTCGATGTGGCTCAAGCACAAGAACTTGACCTGAATCATGCTGCAGACAAACGTAATTTTGATGACCTCAACCAACGTCCGTCTGGTGAAGATGAACCATCACGCCATTGTTAA 429 0.4942 MARPSPCASCKRRRRRCAADCIFAPYFPSDDPQKFAVVHKVFGACNVRKMLQELPVHQRGYAVCSLVYEAKAWAIDRVYGCVGYISSLKNQLAAAQNQVSELRKQLDVAQAQELDLNHAADKRNFDDLNQRPSGEDEPSRHC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01726 142 Pfam Lateral organ boundaries (LOB) domain 6 102 IPR004883 -
Accr10g01726 142 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Accr10g01726 142 Coils Coil 85 112 - -
Accr10g01726 142 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 125 - -
Accr10g01726 142 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01726 Accr-Chr10 41409769 41410404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01726 5 114 AS2 family AT2G30130 70.909 4.83e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr10g01726 LOB 9.9e-36 No_clan