Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01714 ATGGTGATTTCTCGTGAGAACAATGCAAATTTCTCCGTCAAACCCACAAGCCTGCAAGGAGGTGTAGTCGGAGGAAATAGAAGGGCACTGGGGGTGATCAATCAGAACCTCAAGGACTGTGGACCCAATAAGAAGATCTCCGATCCAGTGCATCGACCAATTACCAGGACATTTGCCGCGCAACTTGCTCCCACAAAGCAGCCTCTCCCCGAGGAAAATAAGAAATCAAGTTTAAACTCAAATGGATTTAAAGAATGCATATTTGTGGATGAAGAACACAAGTCAGTGAAGGAGCAGCCAGTACCCATGTCTTTAGAACAACCAGAAGAAGTAATGCAGACTGAAACATATCAGATGGAAGTTGAGATGGAGGATATAGTTGAAGATCCTATCATGGACATTGATTGTAGTGATGTGGACAACCATCTTGCAGCTGTGGACTATGTCCATGAACTTTATTCTTACTACAGAAATATGGAGAATAGTAGCTGTGTGTCACCAAATTATATGTCACAACAATTTGACATTAATGAAAGAATGAGAGCTATACTGATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTCATGCGTGAGACTTTGTTCCTTACAGTGAACCTAATAGACAGGTTTTTGGAGAAGCAATCAGTGATAAGGAAGAAGCTTCAGTTGGTGGGTTTAGTAGCCATGCTTTTAGCATGCAAGTATGAGGAAGTTTCAGTTCCTGTAGTGGAGGATCTGATACTTATATCAGACAAAGCATATACGAGGAAAGAAGTTCTTGAAATGGAGAAGCTGATGCTTAGCACGTTGCAGTTTAACATGACAGTGCCCACACCATATGTGTTTATGAGAAGGTTTTTAAAGGCTGCACAGGCAGATAGAAAAATGGAGTTGCTAGCTTTCTTCTTGATAGAGCTCTCTCTCGTGGATTATGGGATGTTGAAGTTCCCACCTTCTTTGCTAGCTGGAGCTGCAGTTTTTACAGCTCAATGCACCATCCATGGGTTCAAGCAATGGAACAAGACATGTGAATGGCACACCAACTACTCAGAAGATCAACTCTTGGAGTGCTCTAAAATGATGGTTGATTTGCATCAAAAGGCTGAGAAAGGAAAACTAACAGCTGTACATAGGAAGTATTGCACATCTAAACTCAACTATACTTCAAAATGTGAACCAGCAAGTTTCCTTGTGGCGAACCAATTATAG 1215 0.4156 MVISRENNANFSVKPTSLQGGVVGGNRRALGVINQNLKDCGPNKKISDPVHRPITRTFAAQLAPTKQPLPEENKKSSLNSNGFKECIFVDEEHKSVKEQPVPMSLEQPEEVMQTETYQMEVEMEDIVEDPIMDIDCSDVDNHLAAVDYVHELYSYYRNMENSSCVSPNYMSQQFDINERMRAILIDWLIEVQDKFDLMRETLFLTVNLIDRFLEKQSVIRKKLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMLSTLQFNMTVPTPYVFMRRFLKAAQADRKMELLAFFLIELSLVDYGMLKFPPSLLAGAAVFTAQCTIHGFKQWNKTCEWHTNYSEDQLLECSKMMVDLHQKAEKGKLTAVHRKYCTSKLNYTSKCEPASFLVANQL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01714 404 Pfam Cyclin, N-terminal domain 152 276 IPR006671 -
Accr10g01714 404 Gene3D - 152 392 - -
Accr10g01714 404 ProSitePatterns Cyclins signature. 181 212 IPR006671 -
Accr10g01714 404 SUPERFAMILY Cyclin-like 278 396 IPR036915 -
Accr10g01714 404 FunFam G2/mitotic-specific cyclin-1 256 391 - -
Accr10g01714 404 Gene3D - 165 277 - -
Accr10g01714 404 CDD CYCLIN_AtCycB-like_rpt1 128 274 - -
Accr10g01714 404 CDD CYCLIN_AtCycB-like_rpt2 279 395 - -
Accr10g01714 404 SUPERFAMILY Cyclin-like 140 276 IPR036915 -
Accr10g01714 404 SMART Cyclin_C_2 279 396 IPR004367 -
Accr10g01714 404 SMART cyclin_7 283 365 IPR013763 -
Accr10g01714 404 SMART cyclin_7 186 270 IPR013763 -
Accr10g01714 404 PANTHER CYCLINS 106 375 IPR039361 -
Accr10g01714 404 Pfam Cyclin, C-terminal domain 279 394 IPR004367 -
Accr10g01714 404 PIRSF Cyclin_A_B_D_E 3 404 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01714 Accr-Chr10 41268616 41273222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01714 1 400 Core Cell Cycle Gene Families AT1G20610 53.953 1.91e-155 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01714 K21777 - qsa:O6P43_024948 570.466