Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01698 ATGTCTTGCTCGTCGTCATCGGGGTCCGAGGAAGAGGATGAGGGCTTCGATTCCTACAGAAAAGGAGGCTACCACGCCGTTAGGGTCGGCGATCAGTTCGCCGGTGGGAGGTACATAGCTCAGAGGAAGCTTGGGTGGGGTCAGTTTTCCACCGTCTGGCTCGCTTACGATACTCGCAATTCTACATATGTTGCCCTCAAAATCCAGAAAAGTGCAGCCCTGTTTGCTGAGGCTGCCCTTCATGAGATAGATGTTCTTTCATCCATTACTGAGGGCGACCCTTCAAATTCAAAGTGTGTCGTTCAATTGATTGACCACTTTAAGCACTCAGGCCCAAATGGGCAGCACCATTGCATGGTCCTTGAATTCCTTGGTGATAGTTTGCTTCGCCTGGTCAGATACAGACGTTATAAAGGCCTTCCAATGAATAAAGTTAGGGAAATCTGCAAATGCATTTTGATTGGTCTGGATTACTTGCATAGAGAACTTGGTATAATCCACTCAGACCTAAAACCTGAAAATGTCCTTCTCTTATCCACCATTGATCCTGCCAAAGACCCTGTTAGATCTGGACAAAGCCCAATTCTCGAGAGGCCTGAGGGAAGCAATGTTGGATTCTCAAGTGTTGTTGAGAAAAAGTTGAAAAGGAAAGCGAGAAGAGCAGTTGCTAAAATATCAGGAAGAAATTCTCCATTGGTAGGAGCTGTAGGGGTTCCAAAGTCTGATAGAAATGTTGATGGAATTGATGTGCAATGCAAGATAGTAGATTTTGGAAATGCATGCTGGGCAGATAAGCCATTGGCAGTAGAAATCCAGACGAGGCAGTACAGAGCTCCTGAAGTTATACTGCAGACTGGGTATTCCTTCTTTGTTGACATGTGGTCTTTTGCTTGCATCGCTTTTGAGCTTGCCACAGGTGATATGATGTTTACTCCCAAGCCAGGACAAGGTTTTAGTGAGGATGAGGACCACCTTGCCTTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGTTGTTAGCGGAGCAAAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGAATTAGGAGGCTAAAGTTCTGGCCACTTGACAAATTTTTGACTGATAAATACAATTTTTCAGCGAGTGATGCTCGTGAGTTTTCAGAATTTCTTTTGCCCCTTCTGGATTTTTCACCGGAGAAGCGGCCAACTGCACAACAATGTTTAGAACATCCATGGCTTAGTGGTTAA 1245 0.4514 MSCSSSSGSEEEDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTRNSTYVALKIQKSAALFAEAALHEIDVLSSITEGDPSNSKCVVQLIDHFKHSGPNGQHHCMVLEFLGDSLLRLVRYRRYKGLPMNKVREICKCILIGLDYLHRELGIIHSDLKPENVLLLSTIDPAKDPVRSGQSPILERPEGSNVGFSSVVEKKLKRKARRAVAKISGRNSPLVGAVGVPKSDRNVDGIDVQCKIVDFGNACWADKPLAVEIQTRQYRAPEVILQTGYSFFVDMWSFACIAFELATGDMMFTPKPGQGFSEDEDHLALMMELLGKMPRKVVVSGAKSKDFFDRHGDLKRIRRLKFWPLDKFLTDKYNFSASDAREFSEFLLPLLDFSPEKRPTAQQCLEHPWLSG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01698 414 FunFam Serine/threonine-protein kinase SRPK 115 412 - -
Accr10g01698 414 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01698 414 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01698 414 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Accr10g01698 414 SUPERFAMILY Protein kinase-like (PK-like) 32 413 IPR011009 -
Accr10g01698 414 FunFam Protein kinase superfamily protein 24 123 - -
Accr10g01698 414 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 218 - -
Accr10g01698 414 CDD STKc_SRPK 27 412 - -
Accr10g01698 414 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Accr10g01698 414 Pfam Protein kinase domain 250 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01698 414 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01698 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Accr10g01698 414 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01698 Accr-Chr10 41049887 41053193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01698 4 413 EF-hand Containing Proteins AT5G22840 50.976 1.94e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Accr10g01698 Pkinase 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01698 K08832 - gmx:100811724 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00033 9 386534 390090 Accr10g01698 10 41049887 41053193 CCT