Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01696 ATGCAGAGAATATGGCTTCTTATTGTTCTTGTGATTTTCTACTGCGGCATTTATTCAAACGGATTAAATGGTGTTCCTCCAAGACCCAACTCTGTCAACATTGGGGCAATTCTATCCTTCAATTCAACCATTGGCAAAGTTGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCCAATCCATCAGTTCTTAATGGAACTAAACTAAATATTTCATTCCGAGACACCGAACTGTCCACTGGTTTTCTCGGCATCATTGATTCATTATTACTGATGGAGAATAATACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCATGTGATTTCACACATAGCCAATGAACTACAAGTACCCTTACTATCATTTGCAGCAACAGACCCTACCATGACCTCCCTTCAGTTCCCATATTTTGTCAGGACATCACAGAGTGATCAGTTTCAGATGGCCGCTGTGGCAGATATCGTCAACTACTATCAATGGAGGGATGTGATAGCAATCTACATTGACGATGATCATGGAAGAAATGGGATAGTTGCGTTAGAAGATGCGCTAGCTGAGAAACGGTGTAAGATCTCATATAAAGCCCCTCTTAGGCCTAATAACATAAACCGAGAAGAAATAAACAATGCTCTAGTTAAGGTCATTATAAGGGAGTCAAGGGTTATAGTCCTCCACATATACCCTAGTTTTGGTTTAGATGTACTTAAGATGGCTGATTCATTAGGCATGTTGGGAAATGGCTATGTCTGGTTAGCCACTGATTGGCTTTCTACAGTTCTAGATACCGATCCATCTCGGTCATCTTCGAGTGAGCTCCAAGGTGTTATAACCTTGAGAATGTACACACCAGATTCTGGGATGAAAAGGAATTTCTCTTCTAGGTGGGGTAACTTGGTAAATAAGAAAGCTCCTAATCAGAGTCCTTTCATGTGGAACACTTATGGCCTTTATGCCTATGACACTGTTTGGGTCCTTGCATATGCACTTGACTCATTTTTCAATAGTGGAGGGACTTTATCATTTTCAAATGATTCAAGCCTGAACAAACTAATAGGTGATAGACTAGACCTAAATTCTGTTGGGGTCTTTGCAAATGGTAGTTTATTGTTGGAAGAAGTTATGAAGGTTAATAAAACTGGTTTAACAGGTCAAATCATGTTTAGTCCAGATGGTGAGCTTATGAATCCTGCTTATGAGATCATTAATGTGATTGGAACTGGGGTTAGCAGGATTGGATTTTGGTCTAATTCCTCTGGTTTACACACTGGACAAGCACCAGGTCATTCAAATTCTTCAAGTAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTACAACACCGCGCGGCTGGGTTTTCACCAGCGATGGAAGGCATTTGAGAATTGGGGTGCCTCTCAGGATCAGTTACCATGAATTCGTGTCGAGGATTGAAGGATCCGAAATGTTTGGAGGTTATTGTATTGAAGTGTTTAGAGCTGCAGTTGACTTATTGCCTTATCCAGTTCCATACAAGTTCGTCCCTTTTGGAGATGGTAAAACTAACCCATTAAACTCAGAACTTCTACACAAAATCACAACCGGTGAGTTTGATGCTGTGGTAGGTGATATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATTTATTGAATCTGGGCTTGTTGTTGTGGCTCCTATCAGAAAATCAAACTCTAATGCTTGGGCTTTCCTAAGACCATTCACTCCATTGATGTGGTTCGTGACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTTTGGATTTTAGAACGGCGAGTAAATGATGATTTTAGAGGTCCCGCTAGAAGACAGTTTGTGACCATTTTATGGTTTAGTTTTTCAACCCTGTTTTTTGCACATAGAGAGAGAACTGTGAGCACTTTGGGTCGCTTAGTGCTCATAATATGGCTATTTGTAGTTCTGATATTGAACTCCAGCTACATAGCGAGCCTGACCTCCATACTCACAGTGGAACAGCTTTCTTCACCTGTGAAAGGAATCGAAAGCTTAGTGACAGGCAAAGAACTCATTGGCTATTTGAGAGGTTCATTTGCCGAGAACTACCTCACTGAGGAACTCAACATTATGAAATCAAGGCTTGTGCCCTTGAATTCTCCTTCAGACTATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATAATTGATGAACGTGCTTACATGGAGCTCTTTCTTTCAACAAGATGTGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCGAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATCTTGAAGCTATCAGAGAATGGAGATCTTCAGAGAATACATGACAAATGGCTTTCAAGAAGTGCATGCAGTTCAGAAGGGTCAAAGCAAGGCGTAGACAGATTAGAGCTAAAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCCTGTTTCATAGCTCTCCTTTGTTATGTCCTTCGCATGGCCTACCGTTTCAGCCGCCACTCCGACTCCAACCTCGCCGGCTCCTCCCACTCGGCTCGGCTCCGGTCATTTATTTCCTTTGTCAATGAAAAGGAAGATGAAGGGAAAAAAAGCAACAAGCCAAAGAGAAGCAGAAAGGTAGTGCATGAAGATGGGTCAACAATGGATGGCTCCGATATTGACAGTGGTGGTCATTATGAAAATGATTCTTCTCACTGTTAA 2772 0.4185 MQRIWLLIVLVIFYCGIYSNGLNGVPPRPNSVNIGAILSFNSTIGKVAKVAIDAAKDDINSNPSVLNGTKLNISFRDTELSTGFLGIIDSLLLMENNTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTMTSLQFPYFVRTSQSDQFQMAAVADIVNYYQWRDVIAIYIDDDHGRNGIVALEDALAEKRCKISYKAPLRPNNINREEINNALVKVIIRESRVIVLHIYPSFGLDVLKMADSLGMLGNGYVWLATDWLSTVLDTDPSRSSSSELQGVITLRMYTPDSGMKRNFSSRWGNLVNKKAPNQSPFMWNTYGLYAYDTVWVLAYALDSFFNSGGTLSFSNDSSLNKLIGDRLDLNSVGVFANGSLLLEEVMKVNKTGLTGQIMFSPDGELMNPAYEIINVIGTGVSRIGFWSNSSGLHTGQAPGHSNSSSKGLYGVIWPGQTTTTPRGWVFTSDGRHLRIGVPLRISYHEFVSRIEGSEMFGGYCIEVFRAAVDLLPYPVPYKFVPFGDGKTNPLNSELLHKITTGEFDAVVGDITITTNRTKIVDFTQPFIESGLVVVAPIRKSNSNAWAFLRPFTPLMWFVTGMSFFVVGAVVWILERRVNDDFRGPARRQFVTILWFSFSTLFFAHRERTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTGKELIGYLRGSFAENYLTEELNIMKSRLVPLNSPSDYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGVDRLELKSFWGLFLLCGIACFIALLCYVLRMAYRFSRHSDSNLAGSSHSARLRSFISFVNEKEDEGKKSNKPKRSRKVVHEDGSTMDGSDIDSGGHYENDSSHC 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01696 923 SUPERFAMILY Periplasmic binding protein-like I 28 457 IPR028082 -
Accr10g01696 923 FunFam Glutamate receptor 148 302 - -
Accr10g01696 923 MobiDBLite consensus disorder prediction 882 923 - -
Accr10g01696 923 Gene3D - 50 400 - -
Accr10g01696 923 Gene3D - 577 712 - -
Accr10g01696 923 FunFam Glutamate receptor 461 577 - -
Accr10g01696 923 FunFam Glutamate receptor 703 810 - -
Accr10g01696 923 FunFam Glutamate receptor 577 707 - -
Accr10g01696 923 Gene3D - 148 425 - -
Accr10g01696 923 SUPERFAMILY Periplasmic binding protein-like II 442 808 - -
Accr10g01696 923 Pfam Bacterial extracellular solute-binding proteins, family 3 491 807 IPR001638 -
Accr10g01696 923 Gene3D - 461 576 - -
Accr10g01696 923 CDD PBP1_GABAb_receptor_plant 33 425 IPR044440 -
Accr10g01696 923 Gene3D - 728 813 - -
Accr10g01696 923 Pfam Ligand-gated ion channel 808 839 IPR001320 GO:0015276|GO:0016020
Accr10g01696 923 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Accr10g01696 923 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 880 IPR015683 -
Accr10g01696 923 PIRSF IGluLR_plant 1 921 IPR017103 -
Accr10g01696 923 CDD GluR_Plant 466 806 - -
Accr10g01696 923 SMART GluR_14 467 808 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01696 Accr-Chr10 41004657 41009347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01696 1 904 Ion Channels AT1G42540 57.066 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01696 K05387 - gmx:100790502 1432.93