Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01692 ATGATTAACGTTTGGCTTGTGATGTTAATGATCCTCTCTAATGGCCTTTCTTCATCTTTGGGGGGCACGAATAATTCAGCATTACCTGAATTTGTAAATATTGGCGCACTCTTCTCTTTCAATACCACTGCAGGTAAAATTGTAAAAATAGCTATTGAAACAGCAGTTGCAGATATAAACTCTGATCCTTCCATACTTGGAAAAACTAAGCTGAGGGTCTCAATGCAAGAGGACTCCAAATACAGAGGTTTTCTGAGCATTTCTGAGGTCTTGGAGCTCATGGCAATACACACACTGGCAATAATTGGTCCCCAGTCATCTGTAACAGCTCATGTTATATCTCATATTGCAAACGAGCTCCAAGTTCCACTTCTATCATTTTCAGCCACAGACCCTACACTTTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCACCTAGTGATGTTTATCAGATGGCTGCAATTGCTGGGCTTGTAGATTTCTATGGTTGGAGAGATGTTATTGCAATTTATGCTGACGATGACCATGGGAGGAACGGAATTGGTTCCTTAGGGGATAAGCTTGCAGAGAGACGTTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCAACTAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTAATGCTAAATGGGGCCCCCAGGTGTTTGATGTGGCAAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAGCTTTCTCTCTACTCTTCTGGACTCTGAGAATCCCATCCCTTCAGATCAGACAGATAAAGTTCAAGGAGTTCTTACACTGCGTGTGCACACACCTGATTCAGAGCTCAAGAGAAGGTTCTTTTCTAGGTGGAAAAACTTGACTGGGGGAATGACTACTGATAGTCCGCTTGGATTGAACACCTTTGGTCTCTATGCATATGATACTGTTTATATGCTTGCTCGTGCACTTGATACATTTTTCAAACAAGGGAACCGAATCACATTCTCACATGATTCAAAATTATCACAACTACGTGGAGACAGCCTGCATCTTGATGCAGTGAGCATCTTTGATCAAGGAAATCTGTTGCGTACAAGTATATATGGGGTTAACATGACTGGGGTAACAGGTCATATTAAATATGCACCTGATGGGAATCCTATGAATCCATCATATGAAATTATCAATGTGATAGGAACTGGTTTAAGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTTCTTTATTCAAAACCAGCCAATCGTTCCAGTGCAAATCAAAAGCTACTCCCTGTAATATGGCCTGGAGAAACAACCCAGAAGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGTTATTAAGAATTGGGGTGCCAGAAAGGGTTAGTTACCGATCATTTGTCTCACAAATTCCAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTCCTTGCTGCAGTGAACTTATTGCCCTATGCAGTTCCCTATAAGTTCATTCCATTTGGGGATGGTCACAACAACCCTAGTAACACCGAGCTTGTTCGTCTAATCACAGCTGGTGTCTTTGATGCTGCGGTGGGTGACATTACAATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCGTATATTGAGTCTGGTCTAGTAGTTGTAGCACCTGTTAAGAAGGTAGAATCCGGTGCATGGGCTTTTATGAGGCCATTTACGCCGATGATGTGGTGTGTCACAGCAGTCTTCTTCTTAGTCGTGGGGGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGACCTCCCAAAAAGCAAGTCATGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCTTCGTGCTACTTGTATGGCTATTTGTGGTTCTCATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAGCTTTCTTCCCCCATTAAAGGCATTGAAAGTTTAGTAAACAGCAAAGAACCTATCGGCTACTTGCAGGGTTCTTTCACTCGAGGTTACTTAATTGAGGAACTTGGCATTCATGAATCAAGACTCGTTCCTCTAAAAACAGGAATTGAGACTGCTAAAGCATTAAAAGATGGTCCCCAAAAAGGTGGTGTTGCTGCATATGTCGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGTTGTGATCTTACTATTGTAGGTCACGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACTGCCATTCTAGAACTGGCAGAAAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAATAGCGCATGCCTAGCACAAGGTGCTAAGCTTGAAGTGGACAGACTTGATCTTCAATCCTTCTGGGGCCTCTATTTGGTTTGTGGACTAGCCTGCTTGGTTGCTCTCCTCATCTATCTCATACAGATAGTGAGACAGTACTTCAAACACTACTCTGATGAAATCGAGTCTTCCAGCGGTGGCCAGAGCTCGATGTCCGCACGCCTCCGGAAGTTCCTAACGTTTGTGGACGAGAAAGAGGAGGAAGTTAAGCATCGGTCCAAGAGAAGGCAGCTTGAAAGAATCTCATACCGGGGCAGCAGCAGTACTGCGGGTGGATCATTGTCATCATCAACCATGTGCTCCTCCAACAAAGAATATGCTCAATCCTCTTCAAACAAAAGCATGGATTGTGCTTATGAGGCCTGA 2847 0.4306 MINVWLVMLMILSNGLSSSLGGTNNSALPEFVNIGALFSFNTTAGKIVKIAIETAVADINSDPSILGKTKLRVSMQEDSKYRGFLSISEVLELMAIHTLAIIGPQSSVTAHVISHIANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDVYQMAAIAGLVDFYGWRDVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEATREEITDVLVQVALAESRIIILHTNAKWGPQVFDVAKYLGMMGTGYVWIASSFLSTLLDSENPIPSDQTDKVQGVLTLRVHTPDSELKRRFFSRWKNLTGGMTTDSPLGLNTFGLYAYDTVYMLARALDTFFKQGNRITFSHDSKLSQLRGDSLHLDAVSIFDQGNLLRTSIYGVNMTGVTGHIKYAPDGNPMNPSYEIINVIGTGLRRIGYWSNHSGLSVDPPEVLYSKPANRSSANQKLLPVIWPGETTQKPRGWVFPNNGRLLRIGVPERVSYRSFVSQIPGTDMFKGFCIDVFLAAVNLLPYAVPYKFIPFGDGHNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKVESGAWAFMRPFTPMMWCVTAVFFLVVGAVVWILEHRLNDDFRGPPKKQVMTILWFSFSTMFFAHRENTVSTLGRFVLLVWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPIGYLQGSFTRGYLIEELGIHESRLVPLKTGIETAKALKDGPQKGGVAAYVDERAYIELFLSSRCDLTIVGHEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLAQGAKLEVDRLDLQSFWGLYLVCGLACLVALLIYLIQIVRQYFKHYSDEIESSSGGQSSMSARLRKFLTFVDEKEEEVKHRSKRRQLERISYRGSSSTAGGSLSSSTMCSSNKEYAQSSSNKSMDCAYEA 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01692 948 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Accr10g01692 948 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Accr10g01692 948 Gene3D - 50 400 - -
Accr10g01692 948 FunFam Glutamate receptor 148 299 - -
Accr10g01692 948 MobiDBLite consensus disorder prediction 909 927 - -
Accr10g01692 948 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Accr10g01692 948 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 891 IPR015683 -
Accr10g01692 948 MobiDBLite consensus disorder prediction 907 927 - -
Accr10g01692 948 FunFam Glutamate receptor 467 583 - -
Accr10g01692 948 Gene3D - 759 819 - -
Accr10g01692 948 CDD GluR_Plant 472 812 - -
Accr10g01692 948 Gene3D - 148 425 - -
Accr10g01692 948 FunFam Glutamate receptor 709 816 - -
Accr10g01692 948 Gene3D - 465 581 - -
Accr10g01692 948 Pfam Bacterial extracellular solute-binding proteins, family 3 490 812 IPR001638 -
Accr10g01692 948 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Accr10g01692 948 Gene3D - 582 707 - -
Accr10g01692 948 FunFam Glutamate receptor 583 713 - -
Accr10g01692 948 PIRSF IGluLR_plant 1 945 IPR017103 -
Accr10g01692 948 SUPERFAMILY Periplasmic binding protein-like I 26 464 IPR028082 -
Accr10g01692 948 Pfam Receptor family ligand binding region 49 410 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01692 Accr-Chr10 40949371 40953206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01692 5 914 Ion Channels AT3G51480 59.715 0.0 1158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01692 K05387 - gmx:100788917 1407.12