Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01690 ATGGGGGGTGAAGAAAGTGGAGGGAATTCAGTGGCAACATCTTCAGCGACGCCATTAATAAACTGGTGGGATGTTCATGCAACTTCTTCGCTCTCTTCCTGGAACACTACTCTTTATTCTAATTCCTCCTCATGTTGCGAAGATCATCATCTTTCATCAGTTTCTGCGCCTTCTTCAGACAATAATCACCTTTGGACTCACGTACTAGGTGTGGAAAGCAACGAGGAGATACAAAATAGTGGAGAGACGAACTTGATGGAAGAAGTGTCATGTAAAAGCATCATGTACGAACCTGCCTGCAACTATTTGAAGCAACTCGATACTACCTGGGACTACAACCATCACAACAATCATTCTTCTTCATCATCAATCAACAGTAACAACACTACTACTTTTGATCACAAATACTTGCACGATAATAATGGTTTCAACGATGAGTCCGCCGTGCTGGAGAGTGATGAAAGATTGAGCAAGCTGGTCACCACTTGGTCCATAGCTCCCCCTCACCAAACTAATCATAATACCACACACTTTGATCCTTCTCATAATGATAATACTGATCATGTAACTTTGAGTTCTTGTATGGATCATTCTGGGGTGTTTTCTTCGTATGCTGCTCTTGACATGAAGGTTAAGCAAGAACATCATCATCATCATCATGCAAGCTTAAGTGAGGGTTCATTGGCATATCATCAGAATAATAATAATAATGGATACAATAATAACAGTAGTCATCATCAGTATGGGATGATGATGCCCACCAGAAATTTGACTGATGTTATATCTTTTACGGGGAGAATTGGCCGGCCAATCATCGGAATTCATGCACTCAAACCCAGTTTCAGACCACCCTTGTCGTCCTTGATGACTACTACTGTCTCTGATCACTCCAAGAAGCAGCTTTTTCACACATCATCATTGCCGAAAACAAGGGCAAGCAATGGAAGAGGACAAGGGAGCTCCACTACTGAAGTAAAGAAGAAAAGAACCGATGACTCATCCTCACAAGCTATCTTGAAGAAGCCAAAGCAAGATACTTCATCTACAGCTTCTTCTACAAAGGTGCAAGCCCCAAAAGTCAAGCTAGGCGACAGGATTACAACCCTTCAGCAAATTGTGTCGCCATTTGGAAAGACAGACACCGCATCGGTGCTTTTTGAAGCAATTGGGTACATAAAGTTTTTACAAGAACAAGTGCAGCTACTGAGCAACTCTTACATGAAGACTAACTCTCACAGGGAAACAACATGGGGAAGCATGGAGAGAAAAGAGGAGAAGGGAGACTTAAAGAGCAGAGGGCTTTGTTTGGTTCCAATTTCATGGACTCCTCAGTCTTATAGAGATAATTCTACCCCTGATTACTGGACTCCCGCTTACCGAGGTTGCTTATTTAGGTAG 1398 0.4235 MGGEESGGNSVATSSATPLINWWDVHATSSLSSWNTTLYSNSSSCCEDHHLSSVSAPSSDNNHLWTHVLGVESNEEIQNSGETNLMEEVSCKSIMYEPACNYLKQLDTTWDYNHHNNHSSSSSINSNNTTTFDHKYLHDNNGFNDESAVLESDERLSKLVTTWSIAPPHQTNHNTTHFDPSHNDNTDHVTLSSCMDHSGVFSSYAALDMKVKQEHHHHHHASLSEGSLAYHQNNNNNGYNNNSSHHQYGMMMPTRNLTDVISFTGRIGRPIIGIHALKPSFRPPLSSLMTTTVSDHSKKQLFHTSSLPKTRASNGRGQGSSTTEVKKKRTDDSSSQAILKKPKQDTSSTASSTKVQAPKVKLGDRITTLQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNSYMKTNSHRETTWGSMERKEEKGDLKSRGLCLVPISWTPQSYRDNSTPDYWTPAYRGCLFR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01690 465 MobiDBLite consensus disorder prediction 288 357 - -
Accr10g01690 465 Gene3D - 359 417 IPR036638 GO:0046983
Accr10g01690 465 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 411 IPR036638 GO:0046983
Accr10g01690 465 CDD bHLH_AtbHLH_like 361 403 IPR045239 -
Accr10g01690 465 MobiDBLite consensus disorder prediction 339 356 - -
Accr10g01690 465 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 395 IPR011598 GO:0046983
Accr10g01690 465 MobiDBLite consensus disorder prediction 288 321 - -
Accr10g01690 465 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 148 444 - -
Accr10g01690 465 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01690 Accr-Chr10 40907606 40910515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01690 152 465 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 37.500 1.28e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01690 - - pcin:129311824 494.967