Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01677 ATGGCCAGGTCTGTGCCTCTTGTTTCCACCATTTTCGTCCTCCTTCTCCTTCTCGTGGCCACTGAGATGGGGCCTATGGTGGCAGAAGCGAGGACATGCGAGTCTCAGAGCCACCGCTTCAAGGGATCCTGTTTCAGCAGAACTAACTGCGCCAACGTTTGCCGGACTGAGGGCTTCCCCGGAGGTCACTGCCGTGGCTTCCGCCGCCGCTGCTTCTGCACCCGTCCTTGCTGA 234 0.5983 MARSVPLVSTIFVLLLLLVATEMGPMVAEARTCESQSHRFKGSCFSRTNCANVCRTEGFPGGHCRGFRRRCFCTRPC 77
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01677 77 PANTHER DEFENSIN-LIKE PROTEIN 1 7 74 - -
Accr10g01677 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Accr10g01677 77 Gene3D - 31 77 IPR036574 -
Accr10g01677 77 Pfam Gamma-thionin family 31 77 - -
Accr10g01677 77 FunFam Defensin-like protein CAL1 31 77 - -
Accr10g01677 77 SMART gth_4 32 77 IPR003614 GO:0006952
Accr10g01677 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Accr10g01677 77 CDD Knot1 42 74 IPR003614 GO:0006952
Accr10g01677 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Accr10g01677 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr10g01677 Accr-Chr10 40729069 40729428 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01677 1 77 Plant Defensins Gene Families AT2G02100 64.935 1.88e-34 110
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01677 - - gmx:100798577 85.8853