Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01652 ATGCTTTCCCTCCAATGCTGCACCTACCTCCACCATCTTCATCATTATCAGCCGCCGCCGCGCCGCCACAAGCCTCACATGAATCGACCGCCATGCATCTCCCTCTCCGCCACCGCCGTCACCTTCATATGTATTCTGCAACTTCTCTTCCCGTCTGCGATGTCCCAACCTCACAACATGAAGACAAACCAATACGTCTTTGGCACCTTTGACGTCACTAACTACACAACTTTGAAAGTGATTCCACCGGCGTCGATCAACTTCGGAGCGCTCCAGGTGACTCCTGACACCGCCGGCAACATCAACCTCACTAATACCGCCGGTAGAATCCTCTTCCGGAAACCATTCAACCTCTGGGAGGACACCGGAAAAGTTGCTTCCTTCAACACTTCATTCCTCATCAACGTTTATCGCGTCAACAACGCCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCTCCGGACCTCGACATTCCTCTAAACAGCCATGGCCAATACCTCGGACTCACCAACTCCACCACGGACGGCAGCGCCGACAACCACCTAGTCGCCGTCGAGCTAGACACAGTCAAACAAAACTTCGACCCCGACGACAACCACATCGGACTTAACATCAACAGTGTAAAGTCAAAAAACAATGTCTCTCTGTCTCAATTCGGAATCCAGATCGCTCCGGACACCGCCAAATACTATGTAATCTGGATAGAGTACAACGGTTCAAGCAAGAAAATCAACATTTTCATCAGAGAACAACCAGAAAGAACCGGACCTATAGTATCGAAACCTGGAAAACCGGTGTTAACTTCAGATCTAGATCTCAAAACCATCGTGAAACAGAACTCTTACTTTGGGTTCTCTGCTTCGACCGGCACAACCTACCAATTAAACTGTGTTCTGAAATGGAACATGACAGTGGAGATTCTTTCAGAAAACAAGAAAAAGTTGCGATCTTTGAAGATGGGTTTGGGTATCGGGGTGCCACTGATGAGTTTGATTCTTGTGGGGATTGGTGGATTAGTGTGTTATGTTTATAAGAAGAGGAGAAGAAGAAAGTTGGACGATGAACAGATTCTGGGAACGTTGAAGAGCTTGCCGGGAACGCCAAGAGAGTATTCGTTTAAGGAATTGAAGAAGGCGACGAACAATTTCAGTGAGAAGAACAAGCTTGGAGAAGGAGGGTATGGGATGGTGTACAGAGGGATTTTGCAGAAAGAGAATAATTTGGAAGTTGCTGTTAAGAAATTCTGCAGAGATGCTATGAAATGCCAAGATGATTTCTTGGCTGAACTCACCATTATCAATCGTCTTCGTCATAAGCATCTTGTTCGCTTACTAGGTTGGTGCCACAAGAATGGAGTGTTAGTGTTGGTATATGAGTTCATGCCCAATGGCAGCTTAGACAATCACCTTTTCTTTGAGGAAGGGAAACCAGCAACACCTCTAAGTTGGAACGTACGTTACAAAATCATCTCAGGTTTAGCCTCAGCACTTAACTACCTTCACAACGAGTACGACCAAAAAGTAGTCCACAGAGATCTCAAAGCAAGCAATATCATGCTAGACTCAGACTTCAATGCCCGCCTGGGCGACTTTGGCCTGGCTCGAGCCATTGAGCATGAGAAAACCTCATACGCTGAGGTCGAAGGAATCCATGGCACAATGGGTTACATCGCGCCTGAGTGCTTCCACACAGGGAAGGCAACCCGACAATCAGATGTGTTTAGCTTCGGGGCGGTTCTTCTAGAAGTGGTCTGTGGCGAGAGGCCATGGACAAAGAGGGAAGGGTTTCAGTTGTTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGCAGGATTCTTGAGGCAGTGGATAAGAGGCTAGGCAATGAGTATGAGGTTGAAGAAGCAGAGAGAATATTGAAATTAGGGTTAGCTTGTTCTCATCCAATTGCTGCTGAGAGGCCAAAGATGCAACGTATAGTTCAGATCATAAGTGGGGCAGTTCCTATGCCTTATGTGCCTCCAAGCAAGCCTTCTTTTGTTTGGCCTGCTGTTGATTTTGGAAGCTTCATTAGTGATCTCACAACTCCATCATCTACCACTGAAAACACGCCTGTTCATAGAGATTCTGTTCCTCTACATTCATCAAAGTGA 2133 0.4698 MLSLQCCTYLHHLHHYQPPPRRHKPHMNRPPCISLSATAVTFICILQLLFPSAMSQPHNMKTNQYVFGTFDVTNYTTLKVIPPASINFGALQVTPDTAGNINLTNTAGRILFRKPFNLWEDTGKVASFNTSFLINVYRVNNATPGEGVAFVIAPDLDIPLNSHGQYLGLTNSTTDGSADNHLVAVELDTVKQNFDPDDNHIGLNINSVKSKNNVSLSQFGIQIAPDTAKYYVIWIEYNGSSKKINIFIREQPERTGPIVSKPGKPVLTSDLDLKTIVKQNSYFGFSASTGTTYQLNCVLKWNMTVEILSENKKKLRSLKMGLGIGVPLMSLILVGIGGLVCYVYKKRRRRKLDDEQILGTLKSLPGTPREYSFKELKKATNNFSEKNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDAMKCQDDFLAELTIINRLRHKHLVRLLGWCHKNGVLVLVYEFMPNGSLDNHLFFEEGKPATPLSWNVRYKIISGLASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTKREGFQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAERILKLGLACSHPIAAERPKMQRIVQIISGAVPMPYVPPSKPSFVWPAVDFGSFISDLTTPSSTTENTPVHRDSVPLHSSK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01652 710 ProSitePatterns Protein kinases ATP-binding region signature. 389 414 IPR017441 GO:0005524
Accr10g01652 710 Gene3D - 61 321 - -
Accr10g01652 710 ProSitePatterns Legume lectins beta-chain signature. 183 189 IPR019825 -
Accr10g01652 710 SUPERFAMILY Protein kinase-like (PK-like) 365 688 IPR011009 -
Accr10g01652 710 Gene3D Transferase(Phosphotransferase) domain 1 461 662 - -
Accr10g01652 710 CDD STKc_IRAK 389 657 - -
Accr10g01652 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Accr10g01652 710 Gene3D Phosphorylase Kinase; domain 1 368 460 - -
Accr10g01652 710 Pfam Legume lectin domain 64 313 IPR001220 GO:0030246
Accr10g01652 710 Pfam Protein tyrosine and serine/threonine kinase 386 656 IPR001245 GO:0004672|GO:0006468
Accr10g01652 710 PANTHER - 95 661 - -
Accr10g01652 710 SMART serkin_6 383 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01652 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 307 IPR013320 -
Accr10g01652 710 FunFam probable L-type lectin-domain containing receptor kinase S.5 461 662 - -
Accr10g01652 710 CDD lectin_legume_LecRK_Arcelin_ConA 64 305 IPR001220 GO:0030246
Accr10g01652 710 MobiDBLite consensus disorder prediction 690 710 - -
Accr10g01652 710 ProSiteProfiles Protein kinase domain profile. 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01652 710 FunFam probable L-type lectin-domain containing receptor kinase S.5 368 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01652 Accr-Chr10 40491886 40496426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01652 53 673 Receptor kinase-like Gene Family AT5G55830 37.818 4.88e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr10g01652 PK_Tyr_Ser-Thr 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01652 - - gmx:100784558 909.442