Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01645 ATGGCGGCACTATGGGGATCGCTGGCCTCGGGGGGAGACACTTCCAATGCTCATTTGGCTATGGTGATGGTTCAGATTTTCAGTGGAGGATACCACGTCGTCACCAAAGTAGCCCTCAATGTTGGAATCAACCAATTAGTGTTTTGTGTTTTCCGCGATCTCATTGCCCTCGCTATTCTTGCTCCCATCGCTTACATCCGGGAAAAACGGACACGACCGCCCATAACTAAGCGCCTTCTGGTATCATTTTTCTTTCTTGGATTAACAGGGATATTCGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCCTCCGCAATACAACCAGCCATTCCAGTCTTTACTTTTATTTTGGCTGTATTGATGGGTACAGAAAGAGTGAATTTACTCAGATATGAAGGTCTGGCAAAAATTGGAGGAACTCTTATCTGTGTTTGTGGGGCCACTTTTATGGTTTTGTTTCGTGGTCCAGCATTGATAGGATATGCAGATTTGGACATTTTAGCACATAGTGAAATAACTGCAAGAGGGCAACCTGAGCCATATGGATGGTTAATTGGCGGTTTAATGGATCTTGGTTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATCGGAAACTGCATGTGCATGGCTACTTTTCTGGCCATTCAGGCTCCACTATTGAAAAAGTATCCCGCAAGCCTGTCTGTCACAGCATACTCTTACTTCTTCGGAGCTATGCTAATGGTGACAACAGCATTTTTCATGACCAATGAGTCAACTGACTGGAGCTTGACGCCATCTGAAACATTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCATAACATGGTGCAACAAGATTCTGGGTCCAGCCATGGTTGCCCTTTACAACCCACTTCAACCTGCAGCATCCGCCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTGGTTGGGGGATCTTTGATCATCGCTGGTCTATATGCGGTCACTTGGGCAACTTATAGGGAAAGACAAGCAGCACTTGGAGTTATTCCTCAAAGCTCCTGGGTCTCCGAACAAACTATTCATACAGATGCATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATATTTTCAGGGTCACCCAAGTTTTCTGATTAA 1179 0.4419 MAALWGSLASGGDTSNAHLAMVMVQIFSGGYHVVTKVALNVGINQLVFCVFRDLIALAILAPIAYIREKRTRPPITKRLLVSFFFLGLTGIFGNHLLFLIGLSYTNPTYASAIQPAIPVFTFILAVLMGTERVNLLRYEGLAKIGGTLICVCGATFMVLFRGPALIGYADLDILAHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCMCMATFLAIQAPLLKKYPASLSVTAYSYFFGAMLMVTTAFFMTNESTDWSLTPSETFAVIYAGTIASALNYGLITWCNKILGPAMVALYNPLQPAASALLSRIFLGSPIFLGSVVGGSLIIAGLYAVTWATYRERQAALGVIPQSSWVSEQTIHTDALVSKSSFQLGHIFSGSPKFSD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01645 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 158 - -
Accr10g01645 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 346 - -
Accr10g01645 392 PANTHER WAT1-RELATED PROTEIN 19 349 IPR030184 GO:0016020|GO:0022857
Accr10g01645 392 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Accr10g01645 392 Pfam EamA-like transporter family 19 142 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01645 Accr-Chr10 40399179 40403380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01645 16 276 Nodulin-like Gene Family AT3G45870 71.264 2.37e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01645 - - gmx:100781969 607.831