Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01642 ATGACTTCTGATTCCCTTCACTCTGCTACTGTCCTCTCTCAACCATCCCTACCAAAACTCACTTTCTACCCCATAACTTTGAAGTTTGAGGAGGTGGTGTACAAAGTGAAAACAGAGCATAACAGACTCTGTTGTTGGGGAAGTTCTTCATCGAGTTGCAGAGAGAAGACGATATTAAATGGAATCACAGGCATGGTTTTACCAGGTGAGATTCTGGCCATGTTGGGCCCTTCTGGGAGTGGCAAAACGACACTTCTTACAGCTCTTGGAGGTCGTTTTAATGGCGGATCATCATTATCAGGCAAAATCACATACAACAACCAACCTTTCTCTGGCTCCATAAAAAGAAGAACAGGTTTTGTGTCTCAGGACGATGTTCTGTACCCACACCTCTCTGTTTCAGAAACCCTCATGTTCACTGCACTTCTCAGGCTTCCCAATAGCCTCACCAACAAAGAGAAGATCGATCACGTCGAGAGAGTTATCTCAGAACTTGGCCTTACACGTTGCAGAAACAGTATCATTGGAGGAGCATTAGTGAGAGGTATTTCAGGAGGAGAAAAGAAGAGAGTGAGTATTGGTCAAGAAATGCTCATAAATCCAAGTTTGTTGCTGCTTGATGAACCCACTTCTGGTTTGGACTCCACGACGGCTCAGAGGATTATGACTACCATCAAGGCGGTCGCTAGTGGCGGCAGGACGGTGGTCACCACCATTCACCAACCGTCGAGCCGTCTGTATGATTTGTTTGACAAGGTTCTGGTTCTGTCAGAAGGACGAAGTATATATAATGGACCAGCTTATGAAGCTATGGAGTATTTTTCTTCCATTGGCTTCTCCTCATCCATCGCTCTCAATCCTCCTGACATCTTGCTTGATCTTGCTAACGGGATTGCCCCTGACTCCAAGCATGCAAGTGAACAGAGTGAGAGCTTGGAACAAGAAAGGAAGCTAACCAGGGAAACTTTATTTTCTGCTTATGAAAAGAACATTGCTCCTAAGTTGAAACATGAGATTTCCAACTCAGAAAAGGACAACCACAACTTCACGAAACAATATGCTTCATCTAGAAATGACATAACAAAAAGAGAGCAATGGTGCACAAGCTGGTGGTATCAGTTCAAGGTTTTATTACAAAGAGGGATCAGAGAACGCAGATATGAAGCCTTCAATAGACTGAGAATATTCCAAGTCATAAGTGTTGCCTTTCTTGGTGGTCTCTTGTGGTGGCACACCCCAGAATCTCACATTCAAGACAGGGTAGCATTGTTGTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTGTACAATGCAGTTTTCACATTCCCTCAAGAAAGAAGAATGCTGATGAAAGAGAGATCTTCAGGAATGTATCGTCTCTCTTCCTACTTTCTGGCAAGAACAATAGGAGATCTGCCATTAGAGCTTGCACTTCCCACTGCATTTGTCTTCATCATCTATTTCATGGGAGGCCTCAAACCTAATCCTGTCGCCTTCTTTCTCTCACTCCTCGTTGTTCTGTACAGTGTTCTAGTTTCTCAGAGCCTAGGCTTGGCACTTGGAGCTATTCTCATGGACGTTAAAAAGGCCACAACTTTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCTGGAGGCTACTATGTTCAGCAGATTCCACCATTTATAGTGTGGCTTAAGTACTTAAGCTATAGCTATTACTGTTACAGGCTGCTTCTGGGTGTTCAGTACGATGAAGATGATTACTATGAGTGTTCCAATAATAATGGGGTTTTGTGCAGAGTTGAGGATTTCCCTCCAATCAAATCGATGGGTTTGAATCATTTGTGGGTTGATGTGCTCATGATGGCTCTTATGTTGCTGGGTTATCGACTGGTTGCTTATATGGCACTACACAGAGCGAGGTAG 1911 0.4385 MTSDSLHSATVLSQPSLPKLTFYPITLKFEEVVYKVKTEHNRLCCWGSSSSSCREKTILNGITGMVLPGEILAMLGPSGSGKTTLLTALGGRFNGGSSLSGKITYNNQPFSGSIKRRTGFVSQDDVLYPHLSVSETLMFTALLRLPNSLTNKEKIDHVERVISELGLTRCRNSIIGGALVRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIMTTIKAVASGGRTVVTTIHQPSSRLYDLFDKVLVLSEGRSIYNGPAYEAMEYFSSIGFSSSIALNPPDILLDLANGIAPDSKHASEQSESLEQERKLTRETLFSAYEKNIAPKLKHEISNSEKDNHNFTKQYASSRNDITKREQWCTSWWYQFKVLLQRGIRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLMKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYFMGGLKPNPVAFFLSLLVVLYSVLVSQSLGLALGAILMDVKKATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYRLLLGVQYDEDDYYECSNNNGVLCRVEDFPPIKSMGLNHLWVDVLMMALMLLGYRLVAYMALHRAR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01642 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 283 IPR003439 GO:0005524
Accr10g01642 636 CDD ABCG_EPDR 24 265 - -
Accr10g01642 636 Pfam ABC-2 type transporter 240 341 IPR043926 GO:0140359
Accr10g01642 636 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Accr10g01642 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 629 - -
Accr10g01642 636 Gene3D - 48 277 IPR027417 -
Accr10g01642 636 FunFam ABC transporter G family member 22 46 277 - -
Accr10g01642 636 SMART AAA_5 68 260 IPR003593 GO:0016887
Accr10g01642 636 Pfam ABC-2 type transporter 372 578 IPR013525 GO:0016020|GO:0140359
Accr10g01642 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 276 IPR027417 -
Accr10g01642 636 Pfam ABC transporter 59 211 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01642 Accr-Chr10 40258926 40261713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01642 58 259 Calmodulin-binding Proteins AT2G36910 31.925 7.48e-13 70.1