Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01625 ATGGAAATCGTTCGATCTCACGTCCATCGGGATACCTCCACGAACGATGCCGTTATTGCCCTTCCACTCTATCGTTCTGCCCCACCGCTCGAAGTCAGGCTCGAGGATTTCGAGCTATACGCCATGGATCGTCTTCGAGTTCTCAAGGGGATTTCTGATGGTTTATCTCGGGGGAAGAAACCAGAAGAAATGGATCAATTAGTATACAATCTATGGAAAACTCATATGAGGAGTCAACAGGCATCTGAAGTTGAAAATAAGGATATTATATCTCATTTTGTTCTACGTCTTGTGTATTGTCGAACTGAGGATTTGAGGAAATGGTTCCTATCTATGGAAACTTCACTATTTCGCTACCGATTTCGTCGTGAAAATGCAGAAGCTCAGAGGGCAATCATGGCAGAATTTGACCTTCCTTATAAGGTTGTTAGCCTTGTGGAATTCGAGAGTGTGAAGGACAAACTGGAACAAGTTGCCCGGTCCATTGGCCAGTCTCTACGTGACAATGACACTATATTTTACAAGGTACCATTTGAAGAAGTTCCAGAGCTCGTGGCAGGTCGGAAAGTATTTATAAGTCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGTCTCATTGGTAGCCACATTATTCCGCAGTCAGCTATCCAAGACACTCATACTCACAAACAGAAAATGGACATCTACAATTAGAGAACAAGAAAAACATAGATTGACTCCTATTGTGGAAGCCCTGTGCTTAAGTTATCTAGGTCCTGACTATTCTCAGCCAAGGGAGTATGCTCAGATATCATTAAAGGATATTGATCAAGTTGCTAAGAGCTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTTGGTCTCTTTCTGAAGGGTGTTGGTTTGAATCTGGATGATGCACTTGCATTTTGGAGACAAGAGTTCTCTCATAAGGTTGGTCTGGAGAGGTTTGAGAAAGAGTATGCATACAGCATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTATAGTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGAGTTGGAGATCATCATGGATGCCCCTATCGACACTTCAGTGAGGAGAATCTTCGAGCTGCCCTTAATAGAATGGGGGTAAATGGTCGAGCAATTGAAGACGTAATGGACAAAGTACGGAATAGACATTATCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCAAGCAATGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGCCAAAAAATATTGAAGCCTAAGGCGCAAGATCCTCCGAACGCATCCTAA 1371 0.4267 MEIVRSHVHRDTSTNDAVIALPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDGLSRGKKPEEMDQLVYNLWKTHMRSQQASEVENKDIISHFVLRLVYCRTEDLRKWFLSMETSLFRYRFRRENAEAQRAIMAEFDLPYKVVSLVEFESVKDKLEQVARSIGQSLRDNDTIFYKVPFEEVPELVAGRKVFISQGYAYVGMNQVVSLVATLFRSQLSKTLILTNRKWTSTIREQEKHRLTPIVEALCLSYLGPDYSQPREYAQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRQEFSHKVGLERFEKEYAYSIRHNYGKEGKRTDYSPYSCQKVISSTPGVGDHHGCPYRHFSEENLRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKAQDPPNAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01625 456 PANTHER DNA PRIMASE LARGE SUBUNIT 19 448 IPR007238 GO:0006269
Accr10g01625 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 173 438 IPR007238 GO:0006269
Accr10g01625 456 PIRSF DNA_primase_large 3 456 IPR016558 -
Accr10g01625 456 Gene3D - 3 246 - -
Accr10g01625 456 FunFam DNA primase large subunit 5 246 - -
Accr10g01625 456 CDD PriL_PriS_Eukaryotic 23 441 IPR016558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01625 Accr-Chr10 40073972 40081831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01625 1 453 Core DNA Replication Machinery Family AT1G67320 66.395 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01625 K02685 - gmx:100806321 757.288