Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01618 ATGGGATCCAGTAGTAGCAAAGCCACTTCCTCTTGCAATTCGTCGTCGTCTTCCGGCAGTTTCCGGAAGGTTCGATCTAACAAAGGGCATAGAGGATTTCAGTCGTCTTGTCTGGGAACTACCTCTGGATCTCATGACGAACAGAATAAAGTAAATGGCAGTGGTGTCACACACAGCTGTTGCACTGTGACACGATCAAATGAGATGAAATCAAAGTCTTTTAGAGATGATAAAAAGAAAATATCTGATGACATGCCTTGCATGCCTTCCAACATTGACCTTAATGAGTGGGCTCAAACAAGCATCTCCAGTAATTCCTCCAGAACTCGTAGCCGATCTGCTCGTACTTCTTCAACTGGTAGTCGATTTCTTTCTCATTTTAGCTTTATTCCTGGTAATATAAGCTTCAGACTTGGCAGAACCACCAGTTTAGGGTCATCAAGGTCTTGCCATGTTTCTTCTACAACAATGTCAATATTCGATAATGAAGATGATCTTAGTCTGCATCCAGGACCCACTGGCAGCTTGGTTGATAGAAATGAAACTCAACAATCATCAGATTCATCTGGTAACTTGCGGAGTAATCCCTCAGTTTCTTCTATACAGAATGTGGGTAGAGATGGAAATGGTTCTTGTGAAGGGCTGGATATAAACTCCTTTCCTCCAAGAATTCATTCTGAGACTGAAAATGTTGAGGGTCGACAAAACGGAGCTCGAGAACATGTTGAACGGAATTTTCGGTATAGCCGGACTCTAAGTGTTGGGAGGCTTCGTAATAGAGTTCTTCGTCAATCAACTTTATCTGACGTCAGCTTTTGCCCCCAGCAACAAGAGAGAGAAGCAAGGGATGCTAGGGAGGATAATGAAAGACAAGCCAGGGAGGGAGATTCAAGAGTATTACCATCTTTTAGTAATGCTATAAATTCTTCTTCTATTTCTGGTTATCCTCCATCCAGTATGTCTAGCTCCTTATTCAACATCCAAGACTATGAGGTTGAGAATTCGCGGTCAAGAGAAGCTAGGTACCAAGACCTGTTGGAACACAGATCCAACTTCCTTGAACGGAGAAGAAGGATAAGATCCCAGGTTCGTGCTCTTCAGCGATTGGGTAGCCGATTTGAAAATCTATCTGGACATGACAGATCTTGTATCTTGTCTGGTCAGCACAGAAATGGTCATTGTACATGCCGAATTGGCAGTCGTGATACTAGTTCAATTGATGATACCGGTACAAGAGCTAGCATATCAAGAATTGTAATGCTAGCTGAAGCCTTATTTGAGCAATCTGCGGTTTTATCTTCACGCCCTTCTGTGTCTTCCATTGGATCTGTTCCTGCACCTAATGATGTAGTGGAGTCTTTGCCGGTCAGACTATACACAAAGTTGCATAAACATCAGGAGGATGCTGCCCAATGCTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGCGTGAGCTGCCTTGCTATCACCAATTTCATAGAACATGCATAGATAAGTGGCTTAAGGAAATTCACAGGGTATGTCCACTATGTCGGAGGGACATCTGCATATCTGATTCACTGTCAATGGAGAACTAA 1584 0.4306 MGSSSSKATSSCNSSSSSGSFRKVRSNKGHRGFQSSCLGTTSGSHDEQNKVNGSGVTHSCCTVTRSNEMKSKSFRDDKKKISDDMPCMPSNIDLNEWAQTSISSNSSRTRSRSARTSSTGSRFLSHFSFIPGNISFRLGRTTSLGSSRSCHVSSTTMSIFDNEDDLSLHPGPTGSLVDRNETQQSSDSSGNLRSNPSVSSIQNVGRDGNGSCEGLDINSFPPRIHSETENVEGRQNGAREHVERNFRYSRTLSVGRLRNRVLRQSTLSDVSFCPQQQEREARDAREDNERQAREGDSRVLPSFSNAINSSSISGYPPSSMSSSLFNIQDYEVENSRSREARYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRIGSRDTSSIDDTGTRASISRIVMLAEALFEQSAVLSSRPSVSSIGSVPAPNDVVESLPVRLYTKLHKHQEDAAQCYICLVEYEDGDSMRELPCYHQFHRTCIDKWLKEIHRVCPLCRRDICISDSLSMEN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01618 527 MobiDBLite consensus disorder prediction 272 319 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 276 296 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 71 96 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 162 238 - -
Accr10g01618 527 SUPERFAMILY RING/U-box 450 520 - -
Accr10g01618 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 435 519 IPR013083 -
Accr10g01618 527 Pfam Ring finger domain 471 514 IPR001841 -
Accr10g01618 527 MobiDBLite consensus disorder prediction 1 58 - -
Accr10g01618 527 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 526 - -
Accr10g01618 527 ProSiteProfiles Zinc finger RING-type profile. 472 514 IPR001841 -
Accr10g01618 527 SMART ring_2 472 513 IPR001841 -
Accr10g01618 527 MobiDBLite consensus disorder prediction 176 207 - -
Accr10g01618 527 FunFam Putative RING zinc finger domain superfamily protein 441 519 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 30 58 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 1 23 - -
Accr10g01618 527 MobiDBLite consensus disorder prediction 301 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01618 Accr-Chr10 40036389 40041231 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01618 72 521 C3H Transcription Factor Family AT5G45290 48.414 9.75e-108 330