Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01590 ATGTCACTTCTCAGCAGATTCTTTTACAGGAGACCCCCTGATGGTTTGCTGGAATTTGTCGATAGAGTATACGTTTTCGATTCCTGCTTTTCCACTGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATCACCGAGTTACATGAAGAGTTTCCGGACTCTTCCTTCTTCGCTTTCAATTTTCGAGAAGGGGAGAAACGTAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTCATGGATTATCCGCGACAGTATGAGGGTTGCCCTATTCTTCCAGTGTCTTTGGTTCAACATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTTGGGAATCACCAAAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATAGGAGACTACACAGTGGTGAAAGGAAGACACTGGAAATGGTGCATAGAGAGGCACCCAAAGGTTTTTTACAGCTATTTTCGCCTTTGAACCCCTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCTGAGAGAGCACTTTCTCTAGATTGTCTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAATGGATGCAGACCCATGATCCGCATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCTACTCAGATGCTCTACTCCATGAACAAGAAAAAGAAAACCTTAAGGCACTACCGTCAGGCAGACTGTGGTGTGATCAAGATTGACATACAATGTTTAGTACAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACTTGGATCCAGAAAGGGAAGTAATGATGTTCCGCATAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTACCCAAAAGGCTTCCGAGCTGAGGTCTTGTTTGGGGATGTTGAAAGCATATCTCCTCCAAAAGCCCCAACAACTGTGTTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCCTTTTCAAGGGTTCAAGAACTTTTTAGCGGTGCAGAGTGGCTTGACAACGGTGAAGATGCTGCAGTCTGGTTGCTTAAACAACTTTCTGTGTTAAGTGATGTCAAAGAGCTTTCACGGTTGCAAGGTAAAGCAAGTTGGTTCTCATCACCTGCTGACTCTGAAGATGAAAATAACGAGTCAAGCACTGCGGATAGTTCAGATGAAGCCTTTGATGTTATTCCAAAGTCTTCTACTGATATTTCCAAGTTATTGGCACCTGACAACCCTGATCCAATCCATTTAGATTTTGAAAGTGTTGGTGGAAATAATGTACATCTTACTTCAGAACCTCCAGACCCATCGACTGAAACTGTTCCATTGTCTCATCATGCTCCTATTAATGAATATCCTCACAATTCATCTCCACAGTCACCACCGCCAGCACCCCCTCCACTTTGTCCTCCTCTTTCTAATATCAGTGGAGATCCTTGCACCTCTCCTACAGCATCGTCAGCAAATTGCCAGAGCCCAATACCACCCCCTCCTCCTCCTCCGCCATTTGTCTCTTGCAAAACTTTGCCACCTTCCCCACCACCTCCACCACCCGCTATGGGTAGTAAACTTAATGAGGTACGACAGCAATTGTCACAGACACCGCCACCGCCTCCCCCTCCCCCACCAATGCCACCTGCAGTATCAAACATTTCAACTTCATCTAATATTGAGTCTCTCCAAGTGGCAAGACCTCCACCACCACCTCCACCTCCACCACCAGGTCAAGGCGCAATGCCACCTCCACCTCCTCCTCCTCCTCCACCCAATCAAGGTGCAAGGACACCTCTGCCTCCCCCACCCCCTCCACCACCTAGTCGAGGCGCAACGGCACCTATGCCTCCCCCTCCACCTCCACCACCCGGTCGAGGCTCAATAGCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCACCACCCGGTCGAGGCTCAACAGCACCTCCCCCTCCCCCTCCACCACCTGGTCGAGGCTCAACAGCACCTCCCCCTCCACCTCCCCCTCCACCACTTGGTCGAGGCACAAAGGGCCCTCCCCCTCCCCCACCTCCTCCACCCCCTGGTCAAGGTGCAACACCACCTCCACCTCCACCACCACCACCCCCCAGTCATGACACAAAGCGGCCTCCACCCCCTCCACCACCCGGTCGGGGTGCAGCACCTCCCCCGCCTCCTCCTCCACCCGGTCGGGGTGCAGCACCTCCCCCGCCTCCTCCTCCACCCGGTCAGGGTGCAGCACCTCCCCCGCCTCCACCACCTAGTCGGGGCGCACCACCACCTCCTCCCCCTCTTGCAACTAGGGGATCTGGTGTGCCACCGCCACCCCTATCTACTACCAAAGCTAAGCCTTTAGCATCAACAAATATTGGAAGAGGTCGAGGTTCTGGTGGGACTGCTAATACACCGAAGAAAGCTTCGCTAAAGCCCCTACATTGGGTGAAAGTTACACGAGCAATGCAAGGGAGTCTATGGGCTGATACACCAAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGAGTCTTTTTTCAGCAGCGTCTGCTTCTGATGTGAGCAATGCTAAAGGTGCAGGTCGCCGCGGTTCTAATATCAATAAACCTGAAAAAGTTCAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTAATGCAGTTCTAGCATTGGATTCTTCTGCTCTAGACATTGATCAGGTTGAAAATCTTATTAAGTTCTGCCCCACAAAGGAAGAAATGGAAATGTTGAAGAATTACGCTGGCAACAAGGAAATGCTTGGGAAGTGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTAGAAGCTAAATTACGGGTTTTTGCTTTCAAGATCACCTTTTCTAGTCAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCTGCTAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGACACTCGAGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTTTGAGAAGATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCATTTGGAAGCTGCTTCAAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACTGCTTCAGAAAATGATGGTTTTATTTCTGCAGGCTTCCGTAAGGTGTTGAAAATTTTTCTCGATATTGCTGAAGCTGAAGTGAGGTCACTCATATCATTGTATTCTGAAGTGGGAAGAAATGCTGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATCTTGGCTGTCTTCGTGAAGATGTTCAACAAATCAAGGGAGGAGAATGAAAGGCAGGCAGACGCCGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAAAGAACACCTGTAAATACAAATTTTAAAAAAGATGTTCACTAG 3750 0.4709 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNHQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLFSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCLILRAIPSFDSQNGCRPMIRIFGRNFLSKGGLSTQMLYSMNKKKKTLRHYRQADCGVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGDVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGAEWLDNGEDAAVWLLKQLSVLSDVKELSRLQGKASWFSSPADSEDENNESSTADSSDEAFDVIPKSSTDISKLLAPDNPDPIHLDFESVGGNNVHLTSEPPDPSTETVPLSHHAPINEYPHNSSPQSPPPAPPPLCPPLSNISGDPCTSPTASSANCQSPIPPPPPPPPFVSCKTLPPSPPPPPPAMGSKLNEVRQQLSQTPPPPPPPPPMPPAVSNISTSSNIESLQVARPPPPPPPPPPGQGAMPPPPPPPPPPNQGARTPLPPPPPPPPSRGATAPMPPPPPPPPGRGSIAPPPPPPPPPPPPGRGSTAPPPPPPPPGRGSTAPPPPPPPPPLGRGTKGPPPPPPPPPPGQGATPPPPPPPPPPSHDTKRPPPPPPPGRGAAPPPPPPPPGRGAAPPPPPPPPGQGAAPPPPPPPSRGAPPPPPPLATRGSGVPPPPLSTTKAKPLASTNIGRGRGSGGTANTPKKASLKPLHWVKVTRAMQGSLWADTPKQDNQSRPPEIDISELESLFSAASASDVSNAKGAGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSALDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLFEKMPELLDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGFISAGFRKVLKIFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILAVFVKMFNKSREENERQADAEKKKLEKEAMKEQRTPVNTNFKKDVH 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01590 1249 MobiDBLite consensus disorder prediction 1214 1249 - -
Accr10g01590 1249 Coils Coil 1117 1144 - -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 408 850 - -
Accr10g01590 1249 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 603 809 - -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 819 841 - -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 465 479 - -
Accr10g01590 1249 Gene3D - 197 342 - -
Accr10g01590 1249 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Accr10g01590 1249 Gene3D Formin, FH2 domain 837 1222 IPR042201 -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 573 589 - -
Accr10g01590 1249 Coils Coil 1211 1238 - -
Accr10g01590 1249 SMART it6_source 575 1246 IPR015425 -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 516 530 - -
Accr10g01590 1249 ProSiteProfiles Formin homology-2 (FH2) domain profile. 836 1236 IPR015425 -
Accr10g01590 1249 SUPERFAMILY Formin homology 2 domain (FH2 domain) 911 1237 - -
Accr10g01590 1249 FunFam Formin-like protein 836 1222 - -
Accr10g01590 1249 Coils Coil 1015 1035 - -
Accr10g01590 1249 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 531 562 - -
Accr10g01590 1249 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Accr10g01590 1249 Pfam Formin Homology 2 Domain 840 1211 IPR015425 -
Accr10g01590 1249 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 187 IPR029021 -
Accr10g01590 1249 PANTHER FORMIN-J 702 1236 - -
Accr10g01590 1249 SMART PTEN_C2_2 198 964 IPR014020 -
Accr10g01590 1249 MobiDBLite consensus disorder prediction 496 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01590 Accr-Chr10 39767488 39781767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01590 1 439 FH2 protein (formin) Gene Family AT1G31810 75.854 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01590 - - pcin:129311237 1014.22