Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01588 ATGGGATATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGAGGCTGGCAAGGGCAACCGTTTGCTGGGATTCATGTTTGGAAATGTTGATAATTCTGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCTTCCCTGACAGATATAGATTTGTCAGGAAAATCGCCACGAACACCACCTGAAGTTGTTGAACAAGACTATGGTGATAAAGCTGAAGATGCAATTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGTTGCAAATGAAGAGGAAAATTTATTGCCCAAAAAGGAATATTTTTCTGTTGGAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAGATTATGATGAGGAATCTGAAAAGGAGCAAGACTTGGTGAATGACACTTCTGAAGTTAATAACATCTCTTCAACTGGGGAGCCGGTAGAGTCTCTTGCTGATGCATCTAATGGAGAGAAAAGTCAAGAACTTGAACCACATGATGGCTCACAGCAGTCTGAAGAATCGGATACCGAATTGCAAAAACTCCAGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCATTGCCTGTTTTATGTGTTGAAGACGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGCATTCATGAACCTTTGAGAAAGGGAGGGAGGAGAGAGCAACGGCCTTCTATTCCTAGAGATAGATACAAGTCCTTTAATGCATCTGATATTGTAGAAGAGGATGAAGAGGCATTCTTCAGAGGTTCTTCGCACAGTGTCCTGATAAATAAACAGGTTTGTGCAGTTCAAAATGGCATATCAGAAAGCAGTGATGCAGACTTGGATTCATCAAAATTTGGATTTCTGCATGGGGCTGCCTCAATGACTGCAGAAGATAGCCCACAACAGAAAGACTCTTGCCGTAGTGGTGAACCAATGAAACAAGATTGCTCAGGCCTTTCTTGGGAAGGGCATTCTCTCTTGTGTGCTGACTTTTATCCCCTTGATCAGCAAGACTGGGAAGATGAGATCATCTGGGGCAATTCCCCTGCTGCAAGCGACAATAATCATGAGAGCTCTGAAATTTCTGGATCTACGTTGGGACCTCTAGGGTGTGATGAAGGAGAAATTGAAAGTGGCATGCTAAATATCCAGTTGGAGCCGCCAAAGGAATTGGAAGAAAAAAATCATAGTGTATTCTTGTGCACCTATCCTGTTTCATTAGAGCCCTTTGGTTCAAGGGATTCTTCTGGAGCTGAAACTAATTCATTGTCAAAGAATCTATTTCACCCGCAACTCTTGAGGTTGGAATCCAGACCTGAAGTGGATATCACTAATCCTGCAGATGACAGAAGGGAGAATATATCTGAGGAGCATAATCAAAATGGACTAGTAAAGCATTTCACTAGACTTACCTTGCAAAACCCGGATATGGTGGATGGGTCTTGGTTAGACAAGATTATATGGGATGAGGTCAATAGACCTATTGTGAAACCAAAGCTCATCTATGATCTCCAGGATGATCAAATGCACTTTGAAATTTTGGATAGTAAGGATGGTAGACATCTTCCCCTGCATGCAGGGGCAATGATTTTAACTCGTCCTTTAAAATCAAGCCATGGAGATTCTTCTGAGCTACCTGGACATGGAAATCAGCATGGATGGCGATCGATTGCCAATGATAAACATTATTCAAACAGGAAAACTTCCCAGCAACTGAAATCAAATTCTAAAAAACGCTCAGCTCATGGCGTAAAAGTTTTTCACGCTCAACCTGCGTTGAAGCTTCAGACAATGAAACTGAAACTGAGCAACAAAGATATTGCCAATTTTCACCGACCAAGAGCTTTATGGTATCCTCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAGCTGCCAACACAAGGACCAATGAAAGTTATCATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTGGATGCTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCTAAAAAGCTAGATTTGAAACCATTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCGCTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTACATCTAGTTCGTACGAAGATAAATTTGTGGCCTAGGGCACACAGGGTTCCTGGCGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCCGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTATTGAGCAATGCTGGAATGGGTGCCAGACTTTGTACATACTTTCAAAAATGTTCTCCAGATGATCAGGGTGGCTCTTTATTGCGCAACACAAACAGTAGCTTGGGGCATGTGATTTCACTGGATCCTGCCGATAAATCTCCATTTCTTGGAGATTTAAAGCCTGGCTACAGTCAGTCATCATTGGAGACAAACATGTATAGAGCACCCATATTTCCTCATACAGTGCCATTAACCGACTACCTGCTCGTTCGGTCATCAAAGGGAAAGCTGTCATTAAGACGGATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTGTCACCTGGAAGTAAGAATCTTCAGACATATATGATGAACAGGCTCCTAGTATACATGTGCCGTGAATTTCAAGCTGCAGAAAAGCGGCACTTACCTCCATACATCCGTGCCGATGAGCTGCTGTCGCAGTTTCCTTACCTATCAGAGGCTTCTTTTCGCAAGAAAATTAAGGAGTATGCTATATTACAGAAGGGAACAAATGGACTGTCGATTCTGGTTAAGAAGCGAAATTTTCGCATGTGGTCAGAGGATGAATTGAGAAAAATGGTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTCTACCGTCTAAAACATTTAGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCTATGAGCCGCCTTCCTGATGAAGCAATTGCACTGGCGGCTGCATCTCACATTGAGAGGGAGCTGCAAATCACTCCATGGAACCTGAGTAGCAATTTCGTTGCCTGCACCAGCCAGGGGAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGATCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCCCGGGCTATTCCAAAGGCACCATTGTCAAGCACAGTGGTGAAGAAGAAAGCAGCCGCTGCCCGGACTGGTTCCACTGTTACTGGAACAGATGCTGATTTACGCAGATTGAGCATGGAGGCCGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACTCGGTGGCATCGGATTGCTATGATACGCAAACTTTCAAGTGAACAAGCAGCATCTGGAGTTAAGGTTGACCCAACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAATTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAAAGTCTTTCAGCTGTGAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGATCTAGATTCTTTTGCTGGGGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAATGACTTTAAACGTGACAAGGCTGATGGTGTCAAGGGTCTTAAAATGAGAAGACGTCCAACCGTAGCCCAGGCAGAGGAGGAAATAGAAGATGAAGCTGCCGAGGCTGCTGAACTCTGCAGATTACTCATGGATGATGAAGAAGACGAGAGGAAGAAAAAGAAAAAGACTAAATTTATTGTGGAGGAAGCAGGAGTAATTCCAAAACTACAGCCAAAACTTGTCTTTGACAGTACCGATCAGGAGGATCGCGTTTCTGCTAAAAAAAGCAAATTGTTGAAGGTCAATAAAACTAAGATGACTGACCTTTCACCTATCAGCGTGGGAAATAAGAAAATAAAGTTAAATATTGGGGAACCGCCCAAGGTATTCAAGGAGAAAAAGCCATCAAGAGAAAGTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGAACAAACAAGAACTGCCCAAAATACGGTGAAGATCCAGAAGCACAGCCGGAATCTGCAGACATGGAAAAAATGGGTGGAAAATCAAGCTTGTTAGATCCTTCTGGTCAGTCCCAGCATAAAGCCGTTTCCAAGAAGCTTGTTTCAAAAAGCTCATCAAAAATTGCTCTGGTTGAAGCTTCCGAGGGAGAAAAAACTAACGTGAAGGCGAAAGTTGTTCCGGTGAAGTTCAAATGCAGCTCCACTGAAAAACCTGTTATTGAAGCCACACAGAGCTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGATTAGTAGAATCGTAATTCCCAACAAAGTGAAGTCAGATGATATGCAGGCTGAGTCTCGTAAGCATGCCATTGCGATACGCCCTCCAACTGCTCCAAGTAGAAGTCAAGTTGGTTCTCATAAGCCGTCAATTAAAATCCGACCACCTGCAGAAACGGATAGGGAGCAGCCTCAAAAGAAAATTATTATAAAGCGCACAAAGGATGTTATTGATCTGGACCAGTTCAGTCCCAGTGGAAGCATGGGATTTGAGCACAGAAAAACGAAAAGAATCGTTGAATTGTCAGGCATTGACAAGCACAGAAGACAGGAGGCCATGTATAGTCCTGAAGCCGCCCTGGTAAGGCCGAAAGGTAGAGAGGATAGAAGGTGGTGGGATGAGCAAGGGAAAAGGAGAAAAGAAGAAAGACTCCGAGAAGAACATGAGGAAGAAATGAGGATGCTAAAAGAACAAGAACAGGTGAGGATGCTAAAAGAGCAACGTCAAATGAGGATGCTAAAAGGGCAAGAAAGGATAGCTGAGTTAAGAAGATTCGAAGAAACTATTAGGATGGATCGAGAGGAGGAAGAACGGCAGAAAGCAAAGAAGAAGAAGAAGAAGAAGGCTGAGTTTAGAGATGAGTATATAGATGACCACACAAGAAGATTTAACAATAGAGGGTTAGAAAGAGAACGGAGTGGAAAAAGAAGATCTGTCGTTGAGTTGGGAAGCTATGCAGCCGAATATACGCCACCACCTAAACGGCGCAGAGGCGGAGGGGGAGAGGTTGGTTTGGCAAATATTTTGGAACGCATTCTTGAGGCGCTCAAAGATCGGTACGACCTGTCATTCCTTTTCTTAAAACCTGTGTCCAAGAAAGAAGCTCCCGACTACCTGGACATTATAGAGAGGCCTATGGATATTTCAACAATCAGGGATAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTCCGACACGATGTGTGGCAGATTGCATATAATGCCCACAAATATAACGATGGGAGAAACCCAGGAATTCCTCCTCTTGCTGATCAGCTTTTAGAGCTTTGTGATTATTTGTTGAATGAGAATGATGATAGACTAACTGAAGCCGAAGCTGGTATTGAAACTAGGGACTTCTAG 5628 0.4319 MGYDSDSPSQDGRDEDDDEEYEEAGKGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPRTPPEVVEQDYGDKAEDAIDYEDIDEEYDGPETEVANEEENLLPKKEYFSVGASLEALKSRSSVFDDEDYDEESEKEQDLVNDTSEVNNISSTGEPVESLADASNGEKSQELEPHDGSQQSEESDTELQKLQEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRDRYKSFNASDIVEEDEEAFFRGSSHSVLINKQVCAVQNGISESSDADLDSSKFGFLHGAASMTAEDSPQQKDSCRSGEPMKQDCSGLSWEGHSLLCADFYPLDQQDWEDEIIWGNSPAASDNNHESSEISGSTLGPLGCDEGEIESGMLNIQLEPPKELEEKNHSVFLCTYPVSLEPFGSRDSSGAETNSLSKNLFHPQLLRLESRPEVDITNPADDRRENISEEHNQNGLVKHFTRLTLQNPDMVDGSWLDKIIWDEVNRPIVKPKLIYDLQDDQMHFEILDSKDGRHLPLHAGAMILTRPLKSSHGDSSELPGHGNQHGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHAQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEMAVKEQGKLPTQGPMKVIMKSLGGKGSKLHVDAEETLSSVKAKASKKLDLKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKINLWPRAHRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYFQKCSPDDQGGSLLRNTNSSLGHVISLDPADKSPFLGDLKPGYSQSSLETNMYRAPIFPHTVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVYMCREFQAAEKRHLPPYIRADELLSQFPYLSEASFRKKIKEYAILQKGTNGLSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAIPKAPLSSTVVKKKAAAARTGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDFKRDKADGVKGLKMRRRPTVAQAEEEIEDEAAEAAELCRLLMDDEEDERKKKKKTKFIVEEAGVIPKLQPKLVFDSTDQEDRVSAKKSKLLKVNKTKMTDLSPISVGNKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDPEAQPESADMEKMGGKSSLLDPSGQSQHKAVSKKLVSKSSSKIALVEASEGEKTNVKAKVVPVKFKCSSTEKPVIEATQSSDKPVTSDSETAKSAKISRIVIPNKVKSDDMQAESRKHAIAIRPPTAPSRSQVGSHKPSIKIRPPAETDREQPQKKIIIKRTKDVIDLDQFSPSGSMGFEHRKTKRIVELSGIDKHRRQEAMYSPEAALVRPKGREDRRWWDEQGKRRKEERLREEHEEEMRMLKEQEQVRMLKEQRQMRMLKGQERIAELRRFEETIRMDREEEERQKAKKKKKKKAEFRDEYIDDHTRRFNNRGLERERSGKRRSVVELGSYAAEYTPPPKRRRGGGGEVGLANILERILEALKDRYDLSFLFLKPVSKKEAPDYLDIIERPMDISTIRDRVRNMEYKSREDFRHDVWQIAYNAHKYNDGRNPGIPPLADQLLELCDYLLNENDDRLTEAEAGIETRDF 1875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1475 1559 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 592 606 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 186 212 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 161 184 - -
Accr10g01588 1875 Pfam Zinc knuckle 1383 1412 IPR041670 -
Accr10g01588 1875 Gene3D - 1679 1874 IPR036427 GO:0005515
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1 29 - -
Accr10g01588 1875 ProSiteProfiles Ubiquitin domain profile. 667 737 IPR000626 GO:0005515
Accr10g01588 1875 ProSitePatterns Bromodomain signature. 1776 1833 IPR018359 -
Accr10g01588 1875 Coils Coil 1269 1289 - -
Accr10g01588 1875 Gene3D - 649 739 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 138 222 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1476 1498 - -
Accr10g01588 1875 Pfam TATA box-binding protein binding 17 61 IPR009067 -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1423 1439 - -
Accr10g01588 1875 Pfam Protein of unknown function (DUF3591) 586 1153 IPR022591 -
Accr10g01588 1875 SUPERFAMILY Ubiquitin-like 637 737 IPR029071 -
Accr10g01588 1875 Coils Coil 1677 1707 - -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 61 95 - -
Accr10g01588 1875 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1874 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Accr10g01588 1875 SMART bromo_6 1751 1861 IPR001487 GO:0005515
Accr10g01588 1875 PRINTS Bromodomain signature 1822 1841 IPR001487 GO:0005515
Accr10g01588 1875 PRINTS Bromodomain signature 1774 1787 IPR001487 GO:0005515
Accr10g01588 1875 PRINTS Bromodomain signature 1804 1822 IPR001487 GO:0005515
Accr10g01588 1875 PRINTS Bromodomain signature 1788 1804 IPR001487 GO:0005515
Accr10g01588 1875 Gene3D - 21 68 IPR036741 -
Accr10g01588 1875 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Accr10g01588 1875 MobiDBLite consensus disorder prediction 564 612 - -
Accr10g01588 1875 Coils Coil 1631 1654 - -
Accr10g01588 1875 SUPERFAMILY Bromodomain 1742 1864 IPR036427 GO:0005515
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1394 1439 - -
Accr10g01588 1875 Pfam Bromodomain 1762 1837 IPR001487 GO:0005515
Accr10g01588 1875 Pfam Ubiquitin family 672 739 IPR000626 GO:0005515
Accr10g01588 1875 MobiDBLite consensus disorder prediction 1208 1227 - -
Accr10g01588 1875 ProSiteProfiles Bromodomain profile. 1771 1841 IPR001487 GO:0005515
Accr10g01588 1875 SMART ubq_7 667 739 IPR000626 GO:0005515
Accr10g01588 1875 CDD Ubl_TAFs_like 667 738 - -
Accr10g01588 1875 FunFam Transcription initiation factor TFIID subunit 1 649 739 - -
Accr10g01588 1875 CDD Bromodomain 1761 1856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01588 Accr-Chr10 39736892 39763461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01588 667 737 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 3.57e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01588 K03125 - gmx:100780733 2664.03