Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01587 ATGGGATATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGAGGCTGGCAAGGGCAACCGTTTGCTGGGATTCATGTTTGGAAATGTTGATAATTCTGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCTTCCCTGACAGATATAGATTTGTCAGGAAAATCGCCACGAACACCACCTGAAGTTGTTGAACAAGACTATGGTGATAAAGCTGAAGATGCAATTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGTTGCAAATGAAGAGGAAAATTTATTGCCCAAAAAGGAATATTTTTCTGTTGGAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAGATTATGATGAGGAATCTGAAAAGGAGCAAGACTTGGTGAATGACACTTCTGAAGTTAATAACATCTCTTCAACTGGGGAGCCGGTAGAGTCTCTTGCTGATGCATCTAATGGAGAGAAAAGTCAAGAACTTGAACCACATGATGGCTCACAGCAGTCTGAAGAATCGGATACCGAATTGCAAAAACTCCAGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCATTGCCTGTTTTATGTGTTGAAGACGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGCATTCATGAACCTTTGAGAAAGGGAGGGAGGAGAGAGCAACGGCCTTCTATTCCTAGAGATAGATACAAGTCCTTTAATGCATCTGATATTGTAGAAGAGGATGAAGAGGCATTCTTCAGAGGTTCTTCGCACAGTGTCCTGATAAATAAACAGGTTTGTGCAGTTCAAAATGGCATATCAGAAAGCAGTGATGCAGACTTGGATTCATCAAAATTTGGATTTCTGCATGGGGCTGCCTCAATGACTGCAGAAGATAGCCCACAACAGAAAGACTCTTGCCGTAGTGGTGAACCAATGAAACAAGATTGCTCAGGCCTTTCTTGGGAAGGGCATTCTCTCTTGTGTGCTGACTTTTATCCCCTTGATCAGCAAGACTGGGAAGATGAGATCATCTGGGGCAATTCCCCTGCTGCAAGCGACAATAATCATGAGAGCTCTGAAATTTCTGGATCTACGTTGGGACCTCTAGGGTGTGATGAAGGAGAAATTGAAAGTGGCATGCTAAATATCCAGTTGGAGCCGCCAAAGGAATTGGAAGAAAAAAATCATAGTGTATTCTTGTGCACCTATCCTGTTTCATTAGAGCCCTTTGGTTCAAGGGATTCTTCTGGAGCTGAAACTAATTCATTGTCAAAGAATCTATTTCACCCGCAACTCTTGAGGTTGGAATCCAGACCTGAAGTGGATATCACTAATCCTGCAGATGACAGAAGGGAGAATATATCTGAGGAGCATAATCAAAATGGACTAGTAAAGCATTTCACTAGACTTACCTTGCAAAACCCGGATATGGTGGATGGGTCTTGGTTAGACAAGATTATATGGGATGAGGTCAATAGACCTATTGTGAAACCAAAGCTCATCTATGATCTCCAGGATGATCAAATGCACTTTGAAATTTTGGATAGTAAGGATGGTAGACATCTTCCCCTGCATGCAGGGGCAATGATTTTAACTCGTCCTTTAAAATCAAGCCATGGAGATTCTTCTGAGCTACCTGGACATGGAAATCAGCATGGATGGCGATCGATTGCCAATGATAAACATTATTCAAACAGGAAAACTTCCCAGCAACTGAAATCAAATTCTAAAAAACGCTCAGCTCATGGCGTAAAAGTTTTTCACGCTCAACCTGCGTTGAAGCTTCAGACAATGAAACTGAAACTGAGCAACAAAGATATTGCCAATTTTCACCGACCAAGAGCTTTATGGTATCCTCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAGCTGCCAACACAAGGACCAATGAAAGTTATCATGAAGAGCTTGGGTGGCAAGGGGAGTAAACTGCATGTGGATGCTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCTAAAAAGCTAGATTTGAAACCATTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCGCTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTACATCTAGTTCGTACGAAGATAAATTTGTGGCCTAGGGCACACAGGGTTCCTGGCGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCCGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTATTGAGCAATGCTGGAATGGGTGCCAGACTTTGTACATACTTTCAAAAATGTTCTCCAGATGATCAGGGTGGCTCTTTATTGCGCAACACAAACAGTAGCTTGGGGCATGTGATTTCACTGGATCCTGCCGATAAATCTCCATTTCTTGGAGATTTAAAGCCTGGCTACAGTCAGTCATCATTGGAGACAAACATGTATAGAGCACCCATATTTCCTCATACAGTGCCATTAACCGACTACCTGCTCGTTCGGTCATCAAAGGGAAAGCTGTCATTAAGACGGATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTGTCACCTGGAAGTAAGAATCTTCAGACATATATGATGAACAGGCTCCTAGTATACATGTGCCGTGAATTTCAAGCTGCAGAAAAGCGGCACTTACCTCCATACATCCGTGCCGATGAGCTGCTGTCGCAGTTTCCTTACCTATCAGAGGCTTCTTTTCGCAAGAAAATTAAGGAGTATGCTATATTACAGAAGGGAACAAATGGACTGTCGATTCTGGTTAAGAAGCGAAATTTTCGCATGTGGTCAGAGGATGAATTGAGAAAAATGGTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTCTACCGTCTAAAACATTTAGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCTATGAGCCGCCTTCCTGATGAAGCAATTGCACTGGCGGCTGCATCTCACATTGAGAGGGAGCTGCAAATCACTCCATGGAACCTGAGTAGCAATTTCGTTGCCTGCACCAGCCAGGGGAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGATCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCCCGGGCTATTCCAAAGGCACCATTGTCAAGCACAGTGGTGAAGAAGAAAGCAGCCGCTGCCCGGACTGGTTCCACTGTTACTGGAACAGATGCTGATTTACGCAGATTGAGCATGGAGGCCGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACTCGGTGGCATCGGATTGCTATGATACGCAAACTTTCAAGTGAACAAGCAGCATCTGGAGTTAAGGTTGACCCAACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAATTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAAAGTCTTTCAGCTGTGAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGATCTAGATTCTTTTGCTGGGGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAATGACTTTAAACGTGACAAGGCTGATGGTGTCAAGGGTCTTAAAATGAGAAGACGTCCAACCGTAGCCCAGGCAGAGGAGGAAATAGAAGATGAAGCTGCCGAGGCTGCTGAACTCTGCAGATTACTCATGGATGATGAAGAAGACGAGAGGAAGAAAAAGAAAAAGACTAAATTTATTGTGGAGGAAGCAGGAGTAATTCCAAAACTACAGCCAAAACTTGTCTTTGACAGTACCGATCAGGTGAAGCAAATAACTAGTTATGTGCAATTAGATGGAGCCAATATATTGAAAGAAAATACAGTTACAAATCTCAGGGAGGAGGATCGCGTTTCTGCTAAAAAAAGCAAATTGTTGAAGGTCAATAAAACTAAGATGACTGACCTTTCACCTATCAGCGTGGGAAATAAGAAAATAAAGTTAAATATTGGGGAACCGCCCAAGGTATTCAAGGAGAAAAAGCCATCAAGAGAAAGTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGAACAAACAAGAACTGCCCAAAATACGGTGAAGATCCAGAAGCACAGCCGGAATCTGCAGACATGGAAAAAATGGGTGGAAAATCAAGCTTGTTAGATCCTTCTGGTCAGTCCCAGCATAAAGCCGTTTCCAAGAAGCTTGTTTCAAAAAGCTCATCAAAAATTGCTCTGGTTGAAGCTTCCGAGGGAGAAAAAACTAACGTGAAGGCGAAAGTTGTTCCGGTGAAGTTCAAATGCAGCTCCACTGAAAAACCTGTTATTGAAGCCACACAGAGCTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGATTAGTAGAATCGTAATTCCCAACAAAGTGAAGTCAGATGATATGCAGGCTGAGTCTCGTAAGCATGCCATTGCGATACGCCCTCCAACTGCTCCAAGTAGAAGTCAAGTTGGTTCTCATAAGCCGTCAATTAAAATCCGACCACCTGCAGAAACGGATAGGGAGCAGCCTCAAAAGAAAATTATTATAAAGCGCACAAAGGATGTTATTGATCTGGACCAGTTCAGTCCCAGTGGAAGCATGGGATTTGAGCACAGAAAAACGAAAAGAATCGTTGAATTGTCAGGCATTGACAAGCACAGAAGACAGGAGGCCATGTATAGTCCTGAAGCCGCCCTGGTAAGGCCGAAAGGTAGAGAGGATAGAAGGTGGTGGGATGAGCAAGGGAAAAGGAGAAAAGAAGAAAGACTCCGAGAAGAACATGAGGAAGAAATGAGGATGCTAAAAGAACAAGAACAGGTGAGGATGCTAAAAGAGCAACGTCAAATGAGGATGCTAAAAGGGCAAGAAAGGATAGCTGAGTTAAGAAGATTCGAAGAAACTATTAGGATGGATCGAGAGGAGGAAGAACGGCAGAAAGCAAAGAAGAAGAAGAAGAAGAAGGCTGAGTTTAGAGATGAGTATATAGATGACCACACAAGAAGATTTAACAATAGAGGGTTAGAAAGAGAACGGAGTGGAAAAAGAAGATCTGTCGTTGAGTTGGGAAGCTATGCAGCCGAATATACGCCACCACCTAAACGGCGCAGAGGCGGAGGGGGAGAGGTTGGTTTGGCAAATATTTTGGAACGCATTCTTGAGGCGCTCAAAGATCGGTACGACCTGTCATTCCTTTTCTTAAAACCTGTGTCCAAGAAAGAAGCTCCCGACTACCTGGACATTATAGAGAGGCCTATGGATATTTCAACAATCAGGGATAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTCCGACACGATGTGTGGCAGATTGCATATAATGCCCACAAATATAACGATGGGAGAAACCCAGGAATTCCTCCTCTTGCTGATCAGCTTTTAGAGCTTTGTGATTATTTGTTGAATGAGAATGATGATAGACTAACTGAAGCCGAAGCTGGTATTGAAACTAGGGACTTCTAG 5706 0.4306 MGYDSDSPSQDGRDEDDDEEYEEAGKGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPRTPPEVVEQDYGDKAEDAIDYEDIDEEYDGPETEVANEEENLLPKKEYFSVGASLEALKSRSSVFDDEDYDEESEKEQDLVNDTSEVNNISSTGEPVESLADASNGEKSQELEPHDGSQQSEESDTELQKLQEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRDRYKSFNASDIVEEDEEAFFRGSSHSVLINKQVCAVQNGISESSDADLDSSKFGFLHGAASMTAEDSPQQKDSCRSGEPMKQDCSGLSWEGHSLLCADFYPLDQQDWEDEIIWGNSPAASDNNHESSEISGSTLGPLGCDEGEIESGMLNIQLEPPKELEEKNHSVFLCTYPVSLEPFGSRDSSGAETNSLSKNLFHPQLLRLESRPEVDITNPADDRRENISEEHNQNGLVKHFTRLTLQNPDMVDGSWLDKIIWDEVNRPIVKPKLIYDLQDDQMHFEILDSKDGRHLPLHAGAMILTRPLKSSHGDSSELPGHGNQHGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHAQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEMAVKEQGKLPTQGPMKVIMKSLGGKGSKLHVDAEETLSSVKAKASKKLDLKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKINLWPRAHRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYFQKCSPDDQGGSLLRNTNSSLGHVISLDPADKSPFLGDLKPGYSQSSLETNMYRAPIFPHTVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVYMCREFQAAEKRHLPPYIRADELLSQFPYLSEASFRKKIKEYAILQKGTNGLSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAIPKAPLSSTVVKKKAAAARTGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDFKRDKADGVKGLKMRRRPTVAQAEEEIEDEAAEAAELCRLLMDDEEDERKKKKKTKFIVEEAGVIPKLQPKLVFDSTDQVKQITSYVQLDGANILKENTVTNLREEDRVSAKKSKLLKVNKTKMTDLSPISVGNKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDPEAQPESADMEKMGGKSSLLDPSGQSQHKAVSKKLVSKSSSKIALVEASEGEKTNVKAKVVPVKFKCSSTEKPVIEATQSSDKPVTSDSETAKSAKISRIVIPNKVKSDDMQAESRKHAIAIRPPTAPSRSQVGSHKPSIKIRPPAETDREQPQKKIIIKRTKDVIDLDQFSPSGSMGFEHRKTKRIVELSGIDKHRRQEAMYSPEAALVRPKGREDRRWWDEQGKRRKEERLREEHEEEMRMLKEQEQVRMLKEQRQMRMLKGQERIAELRRFEETIRMDREEEERQKAKKKKKKKAEFRDEYIDDHTRRFNNRGLERERSGKRRSVVELGSYAAEYTPPPKRRRGGGGEVGLANILERILEALKDRYDLSFLFLKPVSKKEAPDYLDIIERPMDISTIRDRVRNMEYKSREDFRHDVWQIAYNAHKYNDGRNPGIPPLADQLLELCDYLLNENDDRLTEAEAGIETRDF 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01587 1901 SUPERFAMILY Bromodomain 1768 1890 IPR036427 GO:0005515
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1501 1586 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 592 606 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 161 184 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 186 212 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1 29 - -
Accr10g01587 1901 Coils Coil 1703 1733 - -
Accr10g01587 1901 ProSiteProfiles Ubiquitin domain profile. 667 737 IPR000626 GO:0005515
Accr10g01587 1901 Pfam TATA box-binding protein binding 17 61 IPR009067 -
Accr10g01587 1901 Coils Coil 1269 1289 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 138 222 - -
Accr10g01587 1901 ProSiteProfiles Bromodomain profile. 1797 1867 IPR001487 GO:0005515
Accr10g01587 1901 Coils Coil 1657 1680 - -
Accr10g01587 1901 SUPERFAMILY Ubiquitin-like 637 737 IPR029071 -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 61 95 - -
Accr10g01587 1901 Pfam Ubiquitin family 672 739 IPR000626 GO:0005515
Accr10g01587 1901 Gene3D - 1705 1900 IPR036427 GO:0005515
Accr10g01587 1901 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 564 612 - -
Accr10g01587 1901 Pfam Zinc knuckle 1409 1438 IPR041670 -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1502 1524 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1449 1465 - -
Accr10g01587 1901 FunFam Transcription initiation factor TFIID subunit 1 649 739 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1420 1465 - -
Accr10g01587 1901 Pfam Bromodomain 1788 1863 IPR001487 GO:0005515
Accr10g01587 1901 CDD Bromodomain 1787 1882 - -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1208 1227 - -
Accr10g01587 1901 ProSitePatterns Bromodomain signature. 1802 1859 IPR018359 -
Accr10g01587 1901 Gene3D - 21 68 IPR036741 -
Accr10g01587 1901 PRINTS Bromodomain signature 1800 1813 IPR001487 GO:0005515
Accr10g01587 1901 PRINTS Bromodomain signature 1830 1848 IPR001487 GO:0005515
Accr10g01587 1901 PRINTS Bromodomain signature 1814 1830 IPR001487 GO:0005515
Accr10g01587 1901 PRINTS Bromodomain signature 1848 1867 IPR001487 GO:0005515
Accr10g01587 1901 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1900 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Accr10g01587 1901 SMART ubq_7 667 739 IPR000626 GO:0005515
Accr10g01587 1901 CDD Ubl_TAFs_like 667 738 - -
Accr10g01587 1901 Gene3D - 649 739 - -
Accr10g01587 1901 Pfam Protein of unknown function (DUF3591) 586 1153 IPR022591 -
Accr10g01587 1901 MobiDBLite consensus disorder prediction 1572 1586 - -
Accr10g01587 1901 SMART bromo_6 1777 1887 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01587 Accr-Chr10 39736892 39763461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01587 667 737 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 3.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01587 K03125 - gmx:100780733 2711.02