Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01571 ATGTTTACATGCATAGCGTGTACAAAGCAATTGGCGGAGGAGAGGGAAATTGAAGGAGGAGCCCGTGAGAGTGGCACGCCGAGTGCAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCCCTCAAGTTTTCAGGTGCATATAAGCAATGCAAACCCTGCTCTGGATCCAATAGTTATAGGAAAGGGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTGATATAGGAGGGGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTATCGGCTCCCATTACCCGGCTGGAAGATCTGACCAGAGATTTGTTGGGCCATTTGTTGGTGACCAAACCCCAAGAGGACGTAAATCGGCATCAGTCTGTGATGTCGTTTTGGAGAAAGAGGATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCTGGGGTTCACATTACATTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAGAGAATTCGCTTCAGCCGAGAGATGTTCGATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCACAGATTCAATCGACAAATCAACACTCCTACGAGATCTGAAGATGAGCAAAGAGATTCTTCTTACTCGAGACTGGGATCAGCAAGAGACAGCCCCATGTGCTCATCATTAAACAAAGAATGGACGCAAAGGAACTATCCTAAAACTCCAGGAAACAGAGGGCACCATCCATATGAACTTTCCGATCAAGGTGGAGGACCCCATTTCCAAGGAGGGTCATCGTTTGAAGCATCACGTACAACAACCTCTTCTAGAGATGAACCCTCTATTAGCAATGGCAGTGACATGGAGGCAGAATGGGTAGAGCAAGATGAACCTGGAGTTTACATTACAATCAGACAGTTAACGGACGGGACAAGGGAGCTCCGACGTGTCAGATTCAGTCGCGAAAGATTCGGAGAGGTACATGCCAAGAATTGGTGGGAGGAGAACAGAGAAAGAATACAAGCTCAATACCTTTAA 1056 0.4706 MFTCIACTKQLAEEREIEGGARESGTPSAKEAVKSLTTQIKDMALKFSGAYKQCKPCSGSNSYRKGQRPYPDFDTISEGVPYPDIGGASSSSTPAWDFIGSHYPAGRSDQRFVGPFVGDQTPRGRKSASVCDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKWQAQRWWGENYDRIMELYNVHRFNRQINTPTRSEDEQRDSSYSRLGSARDSPMCSSLNKEWTQRNYPKTPGNRGHHPYELSDQGGGPHFQGGSSFEASRTTTSSRDEPSISNGSDMEAEWVEQDEPGVYITIRQLTDGTRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01571 351 MobiDBLite consensus disorder prediction 207 300 - -
Accr10g01571 351 MobiDBLite consensus disorder prediction 271 289 - -
Accr10g01571 351 Pfam Transcription factor regulating root and shoot growth via Pin3 295 350 IPR013591 -
Accr10g01571 351 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Accr10g01571 351 MobiDBLite consensus disorder prediction 222 247 - -
Accr10g01571 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 351 IPR044532 -
Accr10g01571 351 Pfam Transcription factor BRX N-terminal domain 23 57 IPR027988 -
Accr10g01571 351 ProSiteProfiles BRX domain profile. 296 351 IPR013591 -
Accr10g01571 351 MobiDBLite consensus disorder prediction 207 221 - -
Accr10g01571 351 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01571 Accr-Chr10 39559101 39563037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01571 1 351 Major Intrinsic Protein MIP AT1G31880 66.667 5.46e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01571 - - ccaj:109789470 568.54