Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01566 ATGAACTCTCCGCCGATGTGGACGGCGGTCCAACCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTCAAGTACCTCAAGGCTGGACTGGCCGTTCCCCTCGACCTCCTCATTCCCATTCGCAAGAGCCTTGAATTGATGCCGCCGAAGCTCGTTCATCACCCGTCTTTGGGTTATTGCTCTTATTACGGGAAGAAGATCGACCCAGAGCCGGGGAGGTGTCGAAGGACGGATGGGAAAAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCGAAATACTGTGAACGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCTCAGTCTTCGTCCAATTTGGCATCGGACGTTGCTGCTGCTGGGAGCAGAAGTGGCTCTGGAAGCTTCCAGAGCTTGGCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTTGAAAATAACGTACCACAGTTTCAGATACAGTCTCTTCCTAGTGAGATTAGCAAGAAAGATTACAGGTTCGGACTGAATTCTGAAGTGGACGAGCACAACTTCTTACAGAAAGGATTGGGAAGCACGAGCTATCTCAGTTTTGACTCTGCCTCAGACACCATGTGGCCTCATATCTCACAAGTTCCCTCAGATATTGTCTCAGAGTCAAGAAATAATTCTACCATTGTTAGCAGCTGCTTCCAGCTGGGGACTGTTCGGGATACTGAGCCGCCAAATTTAAACGCTGCAAGATCAAAGCAACATTTCTATGGTGATCAGCTTAGTTTGGCTGGTTGTTTGAAACAGGAATATCATCAGGCCCCGCAGACAACTTTTTCAACCGACTGGCTCTGGAAGAACTCAAGCTCCCCTTCTGTTGAGTATAGATCCAATAAAGACTCTAGCTGTAATCCTGATACTATGAATCCCTTTCAGTGA 960 0.4927 MNSPPMWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRKSLELMPPKLVHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQAASQSSSNLASDVAAAGSRSGSGSFQSLALHGNGAREGLNLENNVPQFQIQSLPSEISKKDYRFGLNSEVDEHNFLQKGLGSTSYLSFDSASDTMWPHISQVPSDIVSESRNNSTIVSSCFQLGTVRDTEPPNLNAARSKQHFYGDQLSLAGCLKQEYHQAPQTTFSTDWLWKNSSSPSVEYRSNKDSSCNPDTMNPFQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01566 319 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr10g01566 319 MobiDBLite consensus disorder prediction 295 319 - -
Accr10g01566 319 PANTHER GROWTH-REGULATING FACTOR 5 13 293 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr10g01566 319 MobiDBLite consensus disorder prediction 116 136 - -
Accr10g01566 319 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr10g01566 319 MobiDBLite consensus disorder prediction 111 136 - -
Accr10g01566 319 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Accr10g01566 319 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr10g01566 319 Pfam WRC 75 117 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01566 Accr-Chr10 39520320 39522879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01566 8 120 GRF Transcription Factor Family AT3G13960 58.120 2.60e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr10g01566 WRC 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01566 - - pcin:129310568 566.614