Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01538 ATGGGTTACGAAAACGATCCGTTTCGTGATGAGGATGGTGAACCCTTGATGGACTATGATGACGTGCAATCCGATCGCGAGCTCTCGCCTGAACCCCAACAGCAAGGTCTATTCGAGGATTTGGAGGAAGACATCGATGATTGGCGCGGTCGAGAAAGATCTCAGACTCCGGTCTACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGAAAGAGGCTTATCAAGAAAGGTGACACTGGGAGCCAGTCTGTGGCTCCAGAGCTTGCTGACGAGGATGAGGAAGCCGATGTTAATATTCCGGCAAGTTTTGTGAGGGACGGATCAGAGGAGGGGGAAGGAAGAAAGAGGAAGGGGAAAGATGGTGGCAGTGGGAAGAAGGAGAAGAGGCACAAGGGGGAGAAGAGGCTAGGGAGTAGTGGTAAGGGCGGTTCTAAATCTGGGCCGTCAAAGAAAACTTTTGCGGCTAAGGCAGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGCGGTGACTCTGAGGATGATCACGAGGGTGTCAGGACAGTCGATGATGATAATTTCATAGATGACACAGGGGTGGAGCCTGCTTTATACGGTAGTGATAATGAAGCTCATTCTCCTAGTAGATATGCCCAGGCAGAGGAAGGTGAGGATGATGATGAGATCAAGCAACTTTTCAAGATGGGTAAGAAGAAGAAGAAGAATGAGAGAAGCCCTGCTGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAGGATGCTGAATTAAATAGACAGGGGAAGCCTGCCATAAATAAGCTGAAGAAGTTGCCTCTTTTAACTGAAGTCCTTGCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTGCTAACTTTGTTGAAGAATTGGCTTGAACCCCTTCCAGACGGAAGCTTGCCAAACATAAACATCCGCACAGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAATCAGTGTAAATAGGAAACTGGCTAAGGAGCTGGTTGATAAATGGAGCCGACCCATATTTAACAAGAGTACAAGATTTGAAGACATGAGAAATGTGGAAGAAGGCACGATTCCTTTCAGAAGGCCTTCAGTGAAGAAGCCTGTAAATAAAGCGTCAGGAACCGAATCCAGAGATGGTGATCTTGAATTAGAATTTTCACAGCGAAAGTCTGGACAATCATCTTCTAGACAACTTACCACCAGACCAGAAGCAACACCATTGGATTTTCTGGTGCGGCCCGCATCTAAAGTTGACCCAGAAGAGATCAGGGCCCGTGCAAAACAAGCTGCACAAGATCAACACCGAATGAAGATGAACAAGAAGCTACAAAATTTGAGGTTACCGAAAAAGAAGCAGCTTCAAGCCACAAAGTTGAGTGTTGAAGGTCGAGGAATGACCAAGTATCTGTAA 1551 0.4533 MGYENDPFRDEDGEPLMDYDDVQSDRELSPEPQQQGLFEDLEEDIDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKGDTGSQSVAPELADEDEEADVNIPASFVRDGSEEGEGRKRKGKDGGSGKKEKRHKGEKRLGSSGKGGSKSGPSKKTFAAKAGKDHDGDVKEMWDTIAGGDSEDDHEGVRTVDDDNFIDDTGVEPALYGSDNEAHSPSRYAQAEEGEDDDEIKQLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLAKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEEGTIPFRRPSVKKPVNKASGTESRDGDLELEFSQRKSGQSSSRQLTTRPEATPLDFLVRPASKVDPEEIRARAKQAAQDQHRMKMNKKLQNLRLPKKKQLQATKLSVEGRGMTKYL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01538 516 Coils Coil 252 272 - -
Accr10g01538 516 MobiDBLite consensus disorder prediction 155 193 - -
Accr10g01538 516 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 245 392 IPR035441 -
Accr10g01538 516 MobiDBLite consensus disorder prediction 433 449 - -
Accr10g01538 516 Pfam TFIIS helical bundle-like domain 332 386 IPR017923 -
Accr10g01538 516 MobiDBLite consensus disorder prediction 1 226 - -
Accr10g01538 516 MobiDBLite consensus disorder prediction 405 455 - -
Accr10g01538 516 PANTHER PROTEIN IWS1 HOMOLOG 1 1 516 IPR044204 GO:0009742|GO:0032784
Accr10g01538 516 ProSiteProfiles TFIIS N-terminal domain profile. 306 389 IPR017923 -
Accr10g01538 516 MobiDBLite consensus disorder prediction 418 432 - -
Accr10g01538 516 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 299 389 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr10g01538 Med26 2.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01538 K17498 - qsa:O6P43_033371 757.673