Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01537 ATGGGTAGCAGTAAGATGGATAAAACTTCAAATGACAAGGAGCCTAAGACACCTCCTGCTACGTCTCAGGAGCATCCTTCAACCACCAGCACTGGAACCACTAATCCTGACTGGTCTAGCTTTCAGGCATATTCTCCTATACCTCCACACGGATACATGGCATCAAATCCCCATGCGCACCCGTATGTGTGGGGTGTCCAGCATATTATGCCTCCCTATGGTACTCCACCCCCACCACATCCCTATGTTGCAATGTATCCCCCTGGAGGAATATATGCTCACCCATCTATACCTCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTGCTTCTAATGGTATTTCTGAGTCTGGAAATATACCTGCCAGCATGGGAAGTGATGCTAAGATTCCTGAGGTGAAGGAAAAATTGCCAATAAAAAGATCAAAAGGAAACTTGGGTGGTTTGAATATGGTCACTGGGAAGAATAATGAATCTAGTAAAACACCAAGGATGTCTACTAATGGAATTCATCCGAAAAGTGGGGAGAGTTCAAATGAAGATACCAGTGAAGGAAGTGATGCAAATTCTGAGGATGACCCTGAGTACGGACCAGAGGGGAGGCAGAATTCTTTGCAAGTGCATACTCCCCAGAATGGGGGAGTTAATTCACATCATAGAGAGGTTGTTAACCAACCTATGCCTATCTCCGTTGCTGGTGCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGAGCACCAACTTCAACAATTCCCGGGCTACTTGGAAAGGTTCCCTCTACTGCAGTTGCTGAGGGGATGGTTACTGGTGGATCACATGACGGTGTTCAGTTACAACATTTGTCACAGGATGAAAGAGAGCTTAAAAGACAGAGGCGGAAGCAATCTAATAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGCGAGGAACTAACCCAACGAGCTGATGCTCTGAAAGAAGAAAATGCTTCCCTCCGTTCAGAATTGAGTCGAATCAAGAGCGAGTGTGAGCAGTTGCTCTCAGAGAATGCTGCACTCAAGGAGAGACTGGGGGAATTGCATGGAAAAGAAGAAGATCTTGGGTCCAGCCAGAATGATGAAAATGTGAGTGACGAACATCAACAGACTGAACAAGAGGAGGATGTGAAGGGTGGTCAATAG 1200 0.465 MGSSKMDKTSNDKEPKTPPATSQEHPSTTSTGTTNPDWSSFQAYSPIPPHGYMASNPHAHPYVWGVQHIMPPYGTPPPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPASNGISESGNIPASMGSDAKIPEVKEKLPIKRSKGNLGGLNMVTGKNNESSKTPRMSTNGIHPKSGESSNEDTSEGSDANSEDDPEYGPEGRQNSLQVHTPQNGGVNSHHREVVNQPMPISVAGAPGAVPGPTTNLNIGMDYWGAPTSTIPGLLGKVPSTAVAEGMVTGGSHDGVQLQHLSQDERELKRQRRKQSNRESARRSRLRKQAECEELTQRADALKEENASLRSELSRIKSECEQLLSENAALKERLGELHGKEEDLGSSQNDENVSDEHQQTEQEEDVKGGQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01537 399 MobiDBLite consensus disorder prediction 363 399 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 1 42 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 203 220 - -
Accr10g01537 399 Coils Coil 287 369 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 288 303 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 383 399 - -
Accr10g01537 399 Pfam Disordered region downstream of MFMR 136 260 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 15 42 - -
Accr10g01537 399 CDD bZIP_plant_GBF1 299 349 IPR045314 GO:0003700|GO:0006355
Accr10g01537 399 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Accr10g01537 399 SMART brlzneu 294 358 IPR004827 GO:0003700|GO:0006355
Accr10g01537 399 MobiDBLite consensus disorder prediction 150 185 - -
Accr10g01537 399 MobiDBLite consensus disorder prediction 274 321 - -
Accr10g01537 399 SUPERFAMILY Leucine zipper domain 297 353 IPR046347 GO:0003700|GO:0006355
Accr10g01537 399 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 301 316 IPR004827 GO:0003700|GO:0006355
Accr10g01537 399 Pfam bZIP transcription factor 294 356 IPR004827 GO:0003700|GO:0006355
Accr10g01537 399 Gene3D - 297 351 - -
Accr10g01537 399 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 296 359 IPR004827 GO:0003700|GO:0006355
Accr10g01537 399 MobiDBLite consensus disorder prediction 140 220 - -
Accr10g01537 399 Pfam G-box binding protein MFMR 1 98 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01537 Accr-Chr10 39172931 39176505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01537 1 395 bZIP Transcription Factor Family AT2G35530 57.561 6.59e-141 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr10g01537 MFMR_assoc 4.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01537 K09060 - gmx:100101882 539.65