Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01535 ATGGGTAGTCGAAAGATGGACAAAGCTTCTAATGACAAGGAGCCTAAGACTCCTTCTGCTACGTCACAGGAGCAGCCTTCAACAACCAGCAGTGGAGCAATAAATCCTGACTGGTCTAGCTTTCAGACATATTCTCCTATGCCTCCGCATGGATACTTGGCATCAAGTCCGCAAGCCCATCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTATGGCACTCCGCCACATCCTTATGTTGCAATGTATCCCCATGGCGGCATATATGCTCATCCAACGATGCCTCCGGTCACAGGATCTTATCCTTTTAGTCCTTTTGCCTTGCCTACTTCCGGTGGTATTGCTGAGGCTTCAGGAAATACACCTGGCAGCATAGAAGGTGATGCTAGGCCTCCTGAGGTGAAGGAAAAATTGCCGGTAAAAAGATCAAAAGGAAGTTTGGGCAATTTGAATATGATCACAGGGAAGAATAATGAACTTAGTAAAAACCCAGGGACTTCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGCGAAGATACAAGTGAAGGAAGCGATGCAAATTCTCAAGATGACTCTGATTTCAAATCAGGAGGCAGGCATAATTCCTTGGAAGCTGAACCGCTTCAAAATGGAAGTTCAGTGCTTGCTCCTCAAAACGGGGGAGTTAACACACATTATAAGGTAAATCAACCTATGCCTATCGCTGCCCCTGGTGTTCCTGGTCCCACAACAAACCTAAATATTGGAATGGATTACTGGGGAGCACCAACTTCTTCTGCAATTCCTGCTATGCACGGAAAGGTTCCTTCTACTGCAGTTGCTGGGGGAATGGTTAGTGCTGGATCACGGGATGGTGTTCAGTCACAACTTTGGGTTCAGGATGAAAGAGAGGTTAAAAGACAAAGACGGAAGCAGTCTAATAGAGAATCAGCTCGCAGATCCAGGTTGCGCAAGCAGGCAGAGTGTGATGAACTAGCGCAGCGTGCCGAGGCCTTGAAAGACGAAAATGCTACTCTCCGGTCAGAACTGAGTCGGATTAAGAGCGAGCATGAACAGTTGCTCTCTGAGAATGCTGCACTCAAGGAGAGACTTGGGGAACTTCCTGAGAAACAAGATTTTAGGTCAGTCCAGAATGATGAAAATGCAAGTAACGAATCTCAACAGACTGGGCAGGAGGAGGCTGTGAAGGGTGATCAGTAG 1212 0.4703 MGSRKMDKASNDKEPKTPSATSQEQPSTTSSGAINPDWSSFQTYSPMPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPTMPPVTGSYPFSPFALPTSGGIAEASGNTPGSIEGDARPPEVKEKLPVKRSKGSLGNLNMITGKNNELSKNPGTSANGIHSKSGESASEDTSEGSDANSQDDSDFKSGGRHNSLEAEPLQNGSSVLAPQNGGVNTHYKVNQPMPIAAPGVPGPTTNLNIGMDYWGAPTSSAIPAMHGKVPSTAVAGGMVSAGSRDGVQSQLWVQDEREVKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKDENATLRSELSRIKSEHEQLLSENAALKERLGELPEKQDFRSVQNDENASNESQQTGQEEAVKGDQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01535 403 Pfam Disordered region downstream of MFMR 137 266 - -
Accr10g01535 403 SMART brlzneu 299 363 IPR004827 GO:0003700|GO:0006355
Accr10g01535 403 Coils Coil 319 367 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 361 403 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 381 403 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 1 46 - -
Accr10g01535 403 Gene3D - 302 356 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 207 230 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 361 380 - -
Accr10g01535 403 CDD bZIP_plant_GBF1 304 354 IPR045314 GO:0003700|GO:0006355
Accr10g01535 403 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 393 IPR044827 GO:0003700|GO:0006355|GO:0043565
Accr10g01535 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 301 364 IPR004827 GO:0003700|GO:0006355
Accr10g01535 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 306 321 IPR004827 GO:0003700|GO:0006355
Accr10g01535 403 MobiDBLite consensus disorder prediction 15 46 - -
Accr10g01535 403 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Accr10g01535 403 SUPERFAMILY Leucine zipper domain 302 358 IPR046347 GO:0003700|GO:0006355
Accr10g01535 403 MobiDBLite consensus disorder prediction 301 324 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 148 187 - -
Accr10g01535 403 MobiDBLite consensus disorder prediction 115 232 - -
Accr10g01535 403 Pfam bZIP transcription factor 299 361 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01535 Accr-Chr10 39161690 39167921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01535 1 399 bZIP Transcription Factor Family AT2G35530 60.976 2.21e-161 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr10g01535 MFMR_assoc 2.8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01535 K09060 - qsa:O6P43_033369 608.986