Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01534 ATGGAGGAAGGATCAGAGCAAGAAAAAGAAGCTCTTCGTCTCAAAGCCATGGCCGAATCCAAATACAAAAGTTCCAACCTCAGCTCTGCTTTGAAATATGCCAAGCGAGCCCAACGCCTTGTTCCTGACCTTGATGGTATCTCCGAAATGGTCACTTCCTTAGACATCCTCAGTGTGGCCTCCAAATCGCCTACTCCAGACTGGTACAAGATACTCCAGGTCGAGCCCTTTGCTCACTCCAATGTCATTCGGAAGCAGTACAAGAAGCTAGCTTTGATTCTTCACCCGGACAAGAATCCCCATTCGGTTTCCGAGGAGGCGTTCAAGCTCGTTGGGGAGGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAGTTTGATATGAAGCTGAGGATTCGGATTCAGGATGAGGCAACAGAGAGTTCGAAGCAGCAGTTGGAGACCTTCTGGACGGCGTGCTGCACTTGTCGACTTCTGCATCAGTTTGAGAGGAAGTATGTGGGTCATAATTTAGTTTGCCCTAGTTGTAAAAAGAGTTTCAAGGCTGTGGAGGTTGAGAATGGTAACGAGTCTGAGGAGGAGGAGGAGATGAGGGTTAGGAATAGAAGCAGGGAGTTGAAAGTTGCGAGCCTGATGAAGAAAGTTGATACTGTTGCTAAATCACGGACCGTGAAGGGGAAAGTGAGCGGTGAAGAGAATGAACCTGTGACCGCCAAGAATGGTAGATTAAAGGATAAAGTTGGAGGCATTGAAATGAGAAATGGGGAATTAGATAGTGAAGGAGCTGTTGGTAAATGGAGTGGGGGAAGACTGAGAAGTGGAGGCTTGAAGAGGAAAATGAGCACTGTTGGGGATGTGTTGGAAAGGTCCAAACCGAAGAAAATTAGAACTCGCGAGGAAACGATGACATTAGCGGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGGAAAAGAGGAAGATGACATTGAAGGTAAAGGAAAAGGAGGGGGATAAGACAGGGAAGGGGAAAGAGCAGGAGGAATTGCTGAAGTATTTAAAAAGTTCTTGGGGTTCGGTGGCTGTCAAACCAAGAAGTTTGAAGAGCGGGAAGCTGGCAGTTGAGGAGAAGCAAGCATCTCTTGCTAAGAGTAAAGAATTGAGAGCTGAGAAGCACAGTAACTCTAGCGTAGGGGACAAGGAAAATATGGCAGTAGAGGATTCAGATTTTTATGATTTTGATAAAGATAGAGTAGAGAGAAGCTTTAAGAAAGGCCAGGTGTGGGCTGTATATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAGTTGTATCAGTAAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAGCAGTGGGGATGAAAAGTTAATTGGTTGGGACAAAAGAGGGTTTCATGTATCTTGTGGGAGATTTAAAGTTGCCAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGATTGTGAACGGGCAGCTCGTGAAGTTTACATAATTTATCCAAAGAAGGGGTCTGTTTGGGCACTTTATAATGAGGCAGCTCCTGGTGTGGAGGGAAGAAGTGTTGCAGTTCAGAGCAAGTGTTGCTATGATATCGTTGTATTTTTGACAAGTTATAGTGAAATAACTGGATTAAGCATGGCATATCTGGGGAAAGTCAAAGGTTACAAGACAATATTCAAGAGACAAGAAATGGGGAGTCATGCTATTAGATATCTTGAAAGAGATAATTTCTGGTCAGTTTCACATCAAATTCCTGCTCGGAAACTTTCTGGCATTGAAACTCCTGAACTTTTAAGAAACTCTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTGGGCTTAATTAG 1887 0.434 MEEGSEQEKEALRLKAMAESKYKSSNLSSALKYAKRAQRLVPDLDGISEMVTSLDILSVASKSPTPDWYKILQVEPFAHSNVIRKQYKKLALILHPDKNPHSVSEEAFKLVGEAFRFLSDKIRRKEFDMKLRIRIQDEATESSKQQLETFWTACCTCRLLHQFERKYVGHNLVCPSCKKSFKAVEVENGNESEEEEEMRVRNRSRELKVASLMKKVDTVAKSRTVKGKVSGEENEPVTAKNGRLKDKVGGIEMRNGELDSEGAVGKWSGGRLRSGGLKRKMSTVGDVLERSKPKKIRTREETMTLAEMQSEIKKKAQEKRKMTLKVKEKEGDKTGKGKEQEELLKYLKSSWGSVAVKPRSLKSGKLAVEEKQASLAKSKELRAEKHSNSSVGDKENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVNPFEVRISWLDLQSSGDEKLIGWDKRGFHVSCGRFKVARKTSINSVNIFSHVVDCERAAREVYIIYPKKGSVWALYNEAAPGVEGRSVAVQSKCCYDIVVFLTSYSEITGLSMAYLGKVKGYKTIFKRQEMGSHAIRYLERDNFWSVSHQIPARKLSGIETPELLRNSWELDPASLPSDLLGLN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01534 628 Pfam DnaJ domain 67 128 IPR001623 -
Accr10g01534 628 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Accr10g01534 628 CDD DnaJ 67 120 IPR001623 -
Accr10g01534 628 Gene3D DnaJ domain 56 156 IPR036869 -
Accr10g01534 628 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Accr10g01534 628 PRINTS DnaJ domain signature 103 123 IPR001623 -
Accr10g01534 628 PRINTS DnaJ domain signature 69 87 IPR001623 -
Accr10g01534 628 PRINTS DnaJ domain signature 87 102 IPR001623 -
Accr10g01534 628 Coils Coil 305 325 - -
Accr10g01534 628 MobiDBLite consensus disorder prediction 312 337 - -
Accr10g01534 628 Pfam Domain of unknown function (DUF3444) 395 602 IPR024593 -
Accr10g01534 628 PANTHER BNAC03G44070D PROTEIN 6 621 - -
Accr10g01534 628 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01534 Accr-Chr10 39153322 39155208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01534 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.863 8.66e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01534 - - qsa:O6P43_033368 738.028