Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01523 ATGGAGCTATTTCCGGCTCAGCCAGATTTGTCTTTGCAGATTAGTCCTCCAAACGCCAAACCCTCACCAGGATGGAGAAATAGTGGTTCACATCAAGAGCATCAGCTTGATTTGGGGTTTTGGAAGAGAGCTTTGGAGACCAGAACCTCATTGCTCTCTTCAATGCCTACAACTACTACTAACTTTTTCGACCTTTCACTCTCCAATAATACCAATAGTCCCAATAACCCTTCAGTTTCTTCCTCAGATCATCACCATCTTCATCTTTCTCACCGCTTTCAAAACGCTCCGTTTCAACAACACCCTCAAGACTTGGGATTTCTCAGACCCATCCGAGGAATCCCGGTGTACCAGAACCTTCCTCATCCTCATCCATCTTTCTCGCAGGTTCAGAATATAGATGCTTCTATGATCACATCTACTGTCAACAACAACTCGACCCCTTTTCCTTATCATAGTCGTAGTCAGGATTTGATGAGGTCGAGGTTCTTGCCTCATCGTTTCCCTACAAAGCGCAGCATGAGAGCTCCCAGGATGCGTTGGACTACCACCCTCCATGCTCGATTTGTTCATGCCGTTGAGCTTTTGGGTGGTCACGAAAGGGCTACACCCAAATCCGTTCTGGAGCTAATGGATGTCAAGGATCTCACTTTAGCCCACGTTAAATCCCATTTACAGATGTATCGGACGGTGAAAACCACAGATAGAGGAGCAGCAGCTTCTTCTACAGGCCAATCAGACGGATATGATAATGGATCATCTGGGGATACTTCTGAAGAATTAATGTTTGACATGAACAATCCTAGTCAGGGAAGACAAAGTGGTCATCAAGAAAAGGAATATCATGGCCTCTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGGAAGCCAAAGGAGACTGATTCTGTTGGAAACAACAATGTTAGTTCTCTTGAGAAAGAGAGAGTATCAGATGGAAGCTCATCGTCAAACATTTCAGGATCAAGCCCTAAGAAGCCTAACCTTGATTTGGAGTTCAGTTTGGGACAACCAATATGA 1041 0.4505 MELFPAQPDLSLQISPPNAKPSPGWRNSGSHQEHQLDLGFWKRALETRTSLLSSMPTTTTNFFDLSLSNNTNSPNNPSVSSSDHHHLHLSHRFQNAPFQQHPQDLGFLRPIRGIPVYQNLPHPHPSFSQVQNIDASMITSTVNNNSTPFPYHSRSQDLMRSRFLPHRFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRGAAASSTGQSDGYDNGSSGDTSEELMFDMNNPSQGRQSGHQEKEYHGLWSNSSREAWLHGKPKETDSVGNNNVSSLEKERVSDGSSSSNISGSSPKKPNLDLEFSLGQPI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01523 346 MobiDBLite consensus disorder prediction 11 31 - -
Accr10g01523 346 MobiDBLite consensus disorder prediction 234 346 - -
Accr10g01523 346 Pfam Myb-like DNA-binding domain 178 229 IPR001005 -
Accr10g01523 346 MobiDBLite consensus disorder prediction 66 83 - -
Accr10g01523 346 MobiDBLite consensus disorder prediction 66 87 - -
Accr10g01523 346 FunFam Myb family transcription factor 175 233 - -
Accr10g01523 346 MobiDBLite consensus disorder prediction 1 31 - -
Accr10g01523 346 SUPERFAMILY Homeodomain-like 174 230 IPR009057 -
Accr10g01523 346 Gene3D - 176 233 - -
Accr10g01523 346 NCBIfam myb-like DNA-binding domain, SHAQKYF class 177 230 IPR006447 GO:0003677
Accr10g01523 346 MobiDBLite consensus disorder prediction 234 274 - -
Accr10g01523 346 MobiDBLite consensus disorder prediction 301 334 - -
Accr10g01523 346 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 345 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01523 Accr-Chr10 38988762 38992790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01523 1 345 G2-like Transcription Factor Family AT4G17695 39.178 6.25e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr10g01523 Myb_DNA-binding 1.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01523 - - gmx:100798081 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01523 10 38988762 38992790 Accr10g01523 10 38988762 38992790 ECH