Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01511 ATGACATTGGTAAGAGAAAGGAGGCACCAGGAAGCTTTAAGGCTTTCCTTACCATCACCTCCAATTCCAGGATCAGGTTTCTGCCATCAAACTCAAATCCCAGCCTCCTGTAGCAACTCTCTGGCCACTAAGAACCTATTGAGCCTCGAGAAACTCACAGTTCTTGGCCATGGCAATGGTGGTACAGTGTATAAAGTCCATCACAAGAAGAACCAGACGTTGTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGATATCTCTCAGCAGGCTAAGTGTGAGGCAGAGATTCTCAGAAGAGTGGATTCACCATATATTGTCAAGTGCCATGAAGTTTTTGACGATAATTACAGTGAATCTCAGGTAAATGGAGGTAGTGGTATTAGCTTTGTTATGGAATACATGGAAAGAGGCTCATTACATGATGTTCTGAGAGAACACAAGGCACTACCAGAGGAAGTGATATCTGTCTTGGCAAAGAGAGTTTTGGGAGGACTCAACTATTTGCATGGCATGAACATAGTGCACAGAGATATTAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAGGTAAAAATTGCAGATTTTGGAGTCAGTCATGTGGTAAAAGGAAGGTTTGAGGCATCAGATTGTAGTGCAGGAACTCGTGCTTATATGAGCCCAGAAAGGGTTGATCCTGAGAAATGGGGAGGCGAAAATGCAGATGAGTTTGCTGGGGATGTGTGGTCATTAGGAGTTTTGATGCTAGAATGTCTTCTGGGTCATTTTCCTTTTACTGATGTAGGCCAAAAAACAGACTGGGTTACATTGATGTGTGTGATTTGTTCTGGTGAGAAGCTTGAAATGCCAGAGAAGGCATCACGTGAGTTCAAAAGCTTTGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGGGCAACAGTTGGTGAGCTTCTTGATCATCCTCTTGTGAATAGCAAGTCTTGTCCTTCTTCTAGCAAAGAATTGCTCAATTATCCTAAGCATTGTTGA 1020 0.4275 MTLVRERRHQEALRLSLPSPPIPGSGFCHQTQIPASCSNSLATKNLLSLEKLTVLGHGNGGTVYKVHHKKNQTLYALKVLRFNQNALDISQQAKCEAEILRRVDSPYIVKCHEVFDDNYSESQVNGGSGISFVMEYMERGSLHDVLREHKALPEEVISVLAKRVLGGLNYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVKGRFEASDCSAGTRAYMSPERVDPEKWGGENADEFAGDVWSLGVLMLECLLGHFPFTDVGQKTDWVTLMCVICSGEKLEMPEKASREFKSFVQRCLEKDWRKRATVGELLDHPLVNSKSCPSSSKELLNYPKHC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01511 339 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Accr10g01511 339 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 35 323 - -
Accr10g01511 339 Gene3D Transferase(Phosphotransferase) domain 1 134 336 - -
Accr10g01511 339 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Accr10g01511 339 PRINTS Tyrosine kinase catalytic domain signature 134 147 IPR001245 GO:0004672|GO:0006468
Accr10g01511 339 PRINTS Tyrosine kinase catalytic domain signature 242 264 IPR001245 GO:0004672|GO:0006468
Accr10g01511 339 SUPERFAMILY Protein kinase-like (PK-like) 50 326 IPR011009 -
Accr10g01511 339 SMART serkin_6 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01511 339 Pfam Protein kinase domain 50 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01511 339 ProSiteProfiles Protein kinase domain profile. 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01511 339 CDD PKc_MAPKK_plant_like 48 321 - -
Accr10g01511 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Accr10g01511 339 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01511 Accr-Chr10 38877149 38878168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01511 1 323 MAP Kinase Kinase Gene Family AT1G32320 53.560 1.28e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr10g01511 Pkinase 3.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01511 K20604 - gmx:100817973 435.261