Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01510 ATGGACGGAGTTAATAACAGCGGCGGCACACAGACGCCTGCTCCGGCTCCCATTCCCAATACCAATGCGCCTCCTCCGTTTCTTAGTAAGACTTATGACATGGTGGATGACTCGTCCAGTGATGCGATCGTTTCTTGGAGCTCAACCAACAATAGCTTTGTGGTTTGGAACCCTCCCGAGTTTGCCAGGGACCTTTTGCCCAAGTACTTTAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAATACATATGGTTTCAGGAAGGTCGATCCAGATCGGTGGGAATTTGCTAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGGCGAAAACCTGCCCATGGTCATAGTCATCAACAGTCACAACAATCTCCTGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTTGGTCTCGAGGAAGAGGTTGAACAGCTCAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGCCACTGATAACCAGATGCAACAAATGGTTCAGCGCCTTCAGGGGATGGAACAACGTCAGCAGCAAATGATGTCATTCCTTGCAAAGGCTGTCCAGAGCCCTGGCTTCTTGACTCAGTTTGTACAACAGCAAAATGAGAGCAATAGGCGCATAACAGAAGCCAACAAGAAACGACGGCTTAAGCAGGATGGTGTTGCTGAAACAGAGTGTGCTACTGCTTCTGATGGACAAATTGTTAAGTATCAACCTTTGGTGAATGAAGCTGCCAAAGCAATGCTTAGGCAGATCATGAAATTGGATACCCCTTGGCTAGAATCTTTCAGTAATAACTCAGACAATTACTTGATTAGCGATACTTCAGCATCATCAGGGGCAATGGACAGTGGCAGCACTTCAAACCGGAGCTGTGGAGTAACCCTTCAAGAGGTCCCACTAACTTCAGTGAATGCTCCCTCAGCTGGCAAATGTGAAATACAATCTTCTCCACAGTCTGCAGCTTCTGAAAATGTTACGGCTGCTCAATACCCTGATGTAAATGTGCTGGGTGGTGCTTCTGAGAAACCTACTGTCCCTGTTTCTGAGGTAGATGTCATGCCTGAGCTTTCTCAGATACCAGAGATGGCGACAGGAAGTATTCTTGATATTCCTGAAGAGAATTATATGGCACCTGAAACAGGAAATGATGGATTCCTGGATCCTAACATATTTGGGGTAAACGGGTCGATGCCCATTGATTTTGGTAGTTTTTCACCTGATACAGACATTGATGACTTATTACGCAACTCTTCTTTTTGGGATGACTTGGTGCAAAGTCCGCTGCCGGAGGATATCGAGGTTGATACTGCTGATGAGTCCAAGGGAAATGAGGTGCAGCCAGCGGAAAATGGATGGGACAAAGGGGAACATATGGATCAACTTACAGAGCAGATGGGTCTCCTTTCTTCTGATGCAAAAAGAGTTTGA 1485 0.4646 MDGVNNSGGTQTPAPAPIPNTNAPPPFLSKTYDMVDDSSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQSQQSPGQSSSVGPCVEVGKFGLEEEVEQLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRLQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNESNRRITEANKKRRLKQDGVAETECATASDGQIVKYQPLVNEAAKAMLRQIMKLDTPWLESFSNNSDNYLISDTSASSGAMDSGSTSNRSCGVTLQEVPLTSVNAPSAGKCEIQSSPQSAASENVTAAQYPDVNVLGGASEKPTVPVSEVDVMPELSQIPEMATGSILDIPEENYMAPETGNDGFLDPNIFGVNGSMPIDFGSFSPDTDIDDLLRNSSFWDDLVQSPLPEDIEVDTADESKGNEVQPAENGWDKGEHMDQLTEQMGLLSSDAKRV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01510 494 MobiDBLite consensus disorder prediction 452 476 - -
Accr10g01510 494 FunFam Heat shock transcription factor 1 20 117 - -
Accr10g01510 494 SUPERFAMILY "Winged helix" DNA-binding domain 23 116 IPR036390 -
Accr10g01510 494 PRINTS Heat shock factor (HSF) domain signature 78 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 PRINTS Heat shock factor (HSF) domain signature 27 50 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 MobiDBLite consensus disorder prediction 115 140 - -
Accr10g01510 494 Gene3D - 20 117 IPR036388 -
Accr10g01510 494 Coils Coil 145 193 - -
Accr10g01510 494 Pfam HSF-type DNA-binding 27 116 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 MobiDBLite consensus disorder prediction 1 16 - -
Accr10g01510 494 MobiDBLite consensus disorder prediction 123 137 - -
Accr10g01510 494 ProSitePatterns HSF-type DNA-binding domain signature. 66 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 SMART hsfneu3 23 116 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr10g01510 494 MobiDBLite consensus disorder prediction 1 28 - -
Accr10g01510 494 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 320 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01510 Accr-Chr10 38866682 38872986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01510 13 488 HSF AT1G32330 55.236 4.53e-171 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr10g01510 HSF_DNA-bind 8.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01510 K09419 - gmx:732544 670.233