Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01507 ATGGGTAGGCCACCGTGTTGTGAGGAGACAGGTGTGAAGAAAGGGCCATGGACGCCCGAAGAAGATGAGAAGCTCATGGCTTATATCAGTAAACATGGCAGTGGAAGCTGGAGAGCACTTCCAAAGCATGCCGGCCTTAACCGATGCGGCAAGAGCTGCCGGTTACGGTGGACCAATTATCTCAGGCCTGATATCCGGAGAGGCAAATTCACCGAAGAAGAGGAGAAACTGATCATCAACCTTCATTCTGTTCTTGGGAACAAGTGGTCGAAGATTGCAACGCATCTTCCAGGGAGGACTGACAATGAGATTAAGAATTTCTGGAACACAAATTTAAGGAAGAAACTTCTTCAGATGGGTATTGATCCAGAAACTCACAAGCCTAGAACTGACTTGAAGTATCTCTTGAATCTCTCCCAGTTACTTGGCACGGCTATTAATAACAACAACTTGATAAGTCCTTCTTGGAGCCATGCTGGTCTTCTGGGTTTGCAGCAACCAGATTTGGCTCATCAATTAGTCCAAATCCAACTTGTGCAGAATCTGTTGCAGCTCATAAATGGCAATTCATCGTTGCTCAGTAACATGCAGAGTGTTCTACCACTCTTGGGCAATCACAACAGTGTCATCAATAACCCAATAGAAGCAGATACAACAAATGGTCCGAACTATACTTTCCCCATCAACTTGAGAGACCAAGAATTACATGCAAGTCCTGCTCTATTTCCTTCAGCACCAAGTGAATCAGGCCAGGATATTTCAGAATCAGGGACAGATCGTGAAGGAGCATCGGATCAACAAGTTTTGGGTATCAATAACAGTATCAGCAGGACAACTTCACATGAAATGAATCAAGCTGATGATGAGAATCCATTTGGTGCAACCAGTTCAGGCAACTTCAACCAAATGGAAGGAAGGTCCAACCAGCAATCACCTCCGTCCACAGTCTTTGATGCTTGGGAAAAACTCTTGGAAGATGATGATGCAAGCGATTCCTATTGGAAAGAACTTTTAGAGTAA 1020 0.4451 MGRPPCCEETGVKKGPWTPEEDEKLMAYISKHGSGSWRALPKHAGLNRCGKSCRLRWTNYLRPDIRRGKFTEEEEKLIINLHSVLGNKWSKIATHLPGRTDNEIKNFWNTNLRKKLLQMGIDPETHKPRTDLKYLLNLSQLLGTAINNNNLISPSWSHAGLLGLQQPDLAHQLVQIQLVQNLLQLINGNSSLLSNMQSVLPLLGNHNSVINNPIEADTTNGPNYTFPINLRDQELHASPALFPSAPSESGQDISESGTDREGASDQQVLGINNSISRTTSHEMNQADDENPFGATSSGNFNQMEGRSNQQSPPSTVFDAWEKLLEDDDASDSYWKELLE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01507 339 CDD SANT 69 112 IPR001005 -
Accr10g01507 339 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr10g01507 339 CDD SANT 16 61 IPR001005 -
Accr10g01507 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 61 IPR017930 -
Accr10g01507 339 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr10g01507 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 281 - -
Accr10g01507 339 MobiDBLite consensus disorder prediction 260 315 - -
Accr10g01507 339 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr10g01507 339 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr10g01507 339 Gene3D - 13 66 - -
Accr10g01507 339 MobiDBLite consensus disorder prediction 240 315 - -
Accr10g01507 339 FunFam MYB-related transcription factor 13 66 - -
Accr10g01507 339 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr10g01507 339 SMART sant 13 63 IPR001005 -
Accr10g01507 339 SMART sant 66 114 IPR001005 -
Accr10g01507 339 FunFam Transcription factor MYB39 69 130 - -
Accr10g01507 339 Gene3D - 68 134 - -
Accr10g01507 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01507 Accr-Chr10 38819644 38821030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01507 1 339 MYB Transcription Factor Family AT5G16770 44.809 2.16e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01507 Myb_DNA-binding 7.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01507 K09422 - gmx:778082 355.91