Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01505 ATGGGAAGACCACCATGTTGTGAGGAGAGTGGTGTGAAGAAAGGGCCATGGATGCCTGAAGAAGATGAGAAGCTTTTTAATTATATCAGCAAACATGGCAGTGGAAATTGGAAAACAGTTCCAAAGCATGCCGGCCTCAATAGATGCGGCAAAAGCTGCCGGCTACGTTGGACCAACTATCTCAGGCCTGATATCAAGAGAGGCAAATTCACTGAAGAAGAGGAGAAATTGATCATCAACCTTCATTCTGTTCTAGGAAACAAGTGGTCGAAGATTGCAACGCATCTTCCAGGGAGGACTGATAATGAAATTAAGAATTTCTGGAACACCAACTTAAGGAAGAAGCTTCTACAGATGGGTATTGATCCAGAAACTCACAAGCCCAGAACTGACTTTAAGAATCTCTCCCAGTTACTTTGCATGGGCATGGCTAATAATAAAAACAACTTGATGAGCCCTTGGAGCCAAGCAGCTCTTCTGGGTTTACAGCAACCAGATTTGACTCAGCAGTTAGTCCAACTCCAACTTCTGCAGAATTTGTTGCAGCTCATAAATGGAGATTCATCTTTTGTCAATAACATGCAGAGTAGTCTCCCACTCTTGGACAATCACATTTCGTTCAATAATAACCCAATAGAATTATATGCGAGCCCTGCTCTGTTTCCTTCGGCACCAAGTGAATCAGGGCAGGATGTTTCAGAATCATGGACAGACCTAGAAGGAGCATCATCAGATCAACAAGTTTCGGGTACTAAAAATACTAGTCTCAGCAGGATAACACATGACAGAAGTCAAGTAGAAAACCTACTTCCTACGTTTGATTCTTCAACCTCATTCAATCAAAGGGAGGTTAACGTTAGCCCTATTATTACACATGAAGTGGCAACCCAGCCAACAACTTCATCCACAATCTATGATACTGATTATTGGGAGAAGCTCTTGGAGGATTATGATACAAACGATGCCTTCTGGAAAGAACTCTTAGACTTCACGTCCACTTCTGAATCGCCCATTTCGTGGTAG 1023 0.4262 MGRPPCCEESGVKKGPWMPEEDEKLFNYISKHGSGNWKTVPKHAGLNRCGKSCRLRWTNYLRPDIKRGKFTEEEEKLIINLHSVLGNKWSKIATHLPGRTDNEIKNFWNTNLRKKLLQMGIDPETHKPRTDFKNLSQLLCMGMANNKNNLMSPWSQAALLGLQQPDLTQQLVQLQLLQNLLQLINGDSSFVNNMQSSLPLLDNHISFNNNPIELYASPALFPSAPSESGQDVSESWTDLEGASSDQQVSGTKNTSLSRITHDRSQVENLLPTFDSSTSFNQREVNVSPIITHEVATQPTTSSTIYDTDYWEKLLEDYDTNDAFWKELLDFTSTSESPISW 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01505 340 MobiDBLite consensus disorder prediction 223 257 - -
Accr10g01505 340 CDD SANT 69 112 IPR001005 -
Accr10g01505 340 Gene3D - 13 66 - -
Accr10g01505 340 CDD SANT 16 61 IPR001005 -
Accr10g01505 340 SMART sant 13 63 IPR001005 -
Accr10g01505 340 SMART sant 66 114 IPR001005 -
Accr10g01505 340 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr10g01505 340 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr10g01505 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr10g01505 340 FunFam Transcription factor MYB39 69 130 - -
Accr10g01505 340 Gene3D - 68 137 - -
Accr10g01505 340 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr10g01505 340 PANTHER F14D16.11-RELATED 1 264 - -
Accr10g01505 340 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr10g01505 340 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr10g01505 340 FunFam MYB-related transcription factor 13 66 - -
Accr10g01505 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01505 Accr-Chr10 38811643 38813099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01505 1 338 MYB Transcription Factor Family AT3G02940 43.402 4.09e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01505 Myb_DNA-binding 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01505 K09422 - gmx:778082 338.576