Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01498 ATGGCGTCCGAAAGCTCCACCGACAGGAACGTTATCTTCAGAAAACTGAAGGCGAAGTCCGAAAATAAGATGTGTTTTGATTGTAATGCAAAGAATTCAACTTGGGCGTCCGTCACTTATGGGGTTTTTCTCTGCATCGATTGCTCGGCTGTTCATCGCAGTCTTGGGGTCCACATAAGTTTTGTGAGATCTACAAATTTGGATTCATGGACCCCTGAGCAACTGAAAATGATGAGTTTTGGAGGAAACAATCGCGCAAAGGTTTTCTTTAAGCAACATGGTTGGACAGACGATGGTAAAATAGAGGCCAAGTATACATCTAGAGCTGCAGAGTTGTATAGACAGATTCTTACTAAGGAAGTTGCTAAAAGTATGGCTGAGGAGGCTGATTTGCCAACATCACCTCTTGCTTCTCAGTCTGCACAAATTTCTAATGGACCTCCTGAAGTTAAAACCGAGGAAGAACCGAAAGAGAACACTGATGGGAAGCCAGCAATTCCTGAAAGCTCTGCTTCACCAAGAGCTTCACATACAATTGTTTCTTCTGTTGTAAAGAAGCCTATTGGTACGAAAAAGCCTGGGAAGAGTGGGGGTCTTGGTGCCCGGAAGCTTACTAAAAAGCCGAGTGAGTCTCTCTATGAGCAGAAGCCAGAAGAACCACCTGCTCCAGTTTCTTCTTCATCAAATAGCAATTTACTTGCTGGGCCACCCCCGGCATCTCGGTTTGAGTATGCTGATGATGTCCAGTCTTCTGAGTCGAACTCTGGAGGGTCACATCTAATTAGTCACGTGGCTCCACCAAAGTCATCAAGCTTCTTTGCAGATTTTGGAATGGATAGTGGTTTTCCAAAGAAATATGGTTCAAATTCCTCAAAAGTGCAAGTTGAAGAATCTGATGAAGCGAGAAGGAAGTTCTCAAATGCTAAAGCTATTTCTTCATCACAATTTTTTGGGGATCAGAACAGAGCAGCAGATGTGGATGCTCAAGTTACTTTGTCGAAGTTTTCAGGTTCGTCTTCCATCTCCAGTGCCGATCTTTTTGGCCATTCTGAATCTCCCATTGATGTCACTGCTAATGACCTCATGAATCGACTGTCCTTCCAGGCTCAGCAAGATATATCTAACATTAAAAATATTGCTGGAGAGACTGGAAAGAAGCTCAGCTCACTGGCCTCCAATTTGTTAACGGACCTTCAAGACAGAATTCTTTAA 1212 0.4348 MASESSTDRNVIFRKLKAKSENKMCFDCNAKNSTWASVTYGVFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNNRAKVFFKQHGWTDDGKIEAKYTSRAAELYRQILTKEVAKSMAEEADLPTSPLASQSAQISNGPPEVKTEEEPKENTDGKPAIPESSASPRASHTIVSSVVKKPIGTKKPGKSGGLGARKLTKKPSESLYEQKPEEPPAPVSSSSNSNLLAGPPPASRFEYADDVQSSESNSGGSHLISHVAPPKSSSFFADFGMDSGFPKKYGSNSSKVQVEESDEARRKFSNAKAISSSQFFGDQNRAADVDAQVTLSKFSGSSSISSADLFGHSESPIDVTANDLMNRLSFQAQQDISNIKNIAGETGKKLSSLASNLLTDLQDRIL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01498 403 Gene3D Arf GTPase activating protein 1 139 IPR038508 -
Accr10g01498 403 MobiDBLite consensus disorder prediction 246 260 - -
Accr10g01498 403 MobiDBLite consensus disorder prediction 133 147 - -
Accr10g01498 403 Pfam Putative GTPase activating protein for Arf 13 112 IPR001164 GO:0005096
Accr10g01498 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Accr10g01498 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Accr10g01498 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Accr10g01498 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 4 403 - -
Accr10g01498 403 MobiDBLite consensus disorder prediction 221 235 - -
Accr10g01498 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Accr10g01498 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Accr10g01498 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Accr10g01498 403 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Accr10g01498 403 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
Accr10g01498 403 MobiDBLite consensus disorder prediction 128 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01498 Accr-Chr10 38701707 38705049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01498 5 83 C2H2 Transcription Factor Family AT3G07940 50.000 5.54e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01498 K12493 K11855 gmx:100785169 621.698