Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01480 ATGGCCAATACTCTCTGCTATTCCCATCTCCTTCTTCCTCTGTTATTCTCCTTCTCCACCTTGTTTCTTTTTGTGAATTCACTTTACGTTCAGAAGTCTGGATTTGCCTCTAATGATGCCGACATTCTCTACATGGGATCTGCAGGATCTCTAGGTGGTAGTGTTCGATTCAACTTGAATCATAAATATACTTGTCAAGTGGGATGGGCTATTTATGCTAGAAGGGTAAAACTTTGGGACTCAAGTACTGGACACATTACTGACTTCACTTCTCACCATACTTTCACAATAGACACTCAAGGTAAAACTATTTATGGCCATGGACTTTGCTTCTTCCTCGCTCCTTTTGGTTTTGAAATCCCTCCAAATTCTGCTACTGGCTTTCTAGGCCTATTCAATACCACAACTAGTCTTTCATCTCAGAGCCAGATTGTTCATGTGGAGTTTGACTCTTACCCAAATTCTGAATGGGGTGAAACCACAGAACATGTGGGAATCAACTATAAATCTGTTGTTTCATCAGTGTCTACGTTTTGGAATGCTAGCCTACACAGTGATGATGCTGCAGATGTGTGGATCACCTACAACTCTGCATCGAAGAACTTGAGTGTAACATGGAAATATCAGAGCACACAGAGTCCTCAAGAGAACAATACTCTTTCTTATCTAATTGATTTATCCAAGGCTTTGCCTGAATGGGTTACAGTTGGATTTTCTGGTGCAACAGGATCGGTTGGAGAACTTCATACTCTTCTCTCTTGGGAGTTCAACTCAACTTTGGATGATACTGAACAAGGCAAAAACAAGACAACACTTATAGTGGTTCTGGGCACTGTTTTAGGGAGTATTGTTTTGATAGTTGGAGGAGCAATAGTAGCATATGCATTACTTAGGAGGAAGAAGGAAATGAAAAGCAAAAAGGAAGAAGGTATGAACTTAACATCAATGAATGACGATCTTGAAAGAGGAGCAGGACCAAGAAGATTCTCTCACAGAGAGCTTGCTAAAGCTACCAATAGTTTCTCTGAGGACAGGAAACTTGGTCAAGGTGGGTTTGGAGCCGTTTACAGAGGTTATTTTCCTCATATGGATTTAACCGTTGCGGTGAAAAAAATATCAAAAGGATCAAGGCAAGGGAAAAGAGAGTATGTAACCGAGGTTAAGATCATTAGTCAGCTAAGACACAGGAATCTTGTGCAGCTAATCGGTTGGTGTCATGAAAAAGGCAACTTCCTACTTGTTTATGAGCTCATGCCAAATGGTAGCCTTGATGCTCATTTGTCAGGGAAGAAGCCTCCTCTTCCATGGAACATGAGGCACAAGATAGCTCTAGGATTAGCCTCAGGAGTGCTCTACCTTCATGAAGAATGGCAACAATGCGTGGTTCACAGAGATATCAAATCAAGCAACGTGATGCTAGATTCCAATTTCAATGTAAAACTTGGAGACTTCGGGTTGGCAAAGCTCGTGGACCACGATCTCGGACCCCAAACAACACGATTGGCAGGCACAATGGGCTATATGGCTCCAGAATACGTGAGTACAGGAAGGGCCAGTAAAGAGTCAGATGTTTATAGTTTTGGGGTAGTTGTCTTAGAGATAGCCACAGGAAGAAAGGCGAATGACCTTATGAAACATGGAGATGCAGAAATAGGATTGATTGAGTGGGTTTGGGATCATTATGGGAGAGGAGAGCTAACTTTGGCCATGGATGAAATTTTGCAGAAGGATTATAATGAGAGAGAAGTGGAGTGTTTGATGATTGTAGGGCTATGGTGTGCCCACCCAGATAAGAATTTAAGGCCAACCATTAGGCAAGCAATTCAAGTTTTGTGCTTTGAGGCTGTCCTGCCAGATCTTCCATCAAAGAAGCCTGTTCCTATGTATCATGTTCCCACACCAAACGTTGTCTCCCAAGGTGCTTCCTTGACCACAACTCTGCAAACAGGTCGTTGA 1956 0.4238 MANTLCYSHLLLPLLFSFSTLFLFVNSLYVQKSGFASNDADILYMGSAGSLGGSVRFNLNHKYTCQVGWAIYARRVKLWDSSTGHITDFTSHHTFTIDTQGKTIYGHGLCFFLAPFGFEIPPNSATGFLGLFNTTTSLSSQSQIVHVEFDSYPNSEWGETTEHVGINYKSVVSSVSTFWNASLHSDDAADVWITYNSASKNLSVTWKYQSTQSPQENNTLSYLIDLSKALPEWVTVGFSGATGSVGELHTLLSWEFNSTLDDTEQGKNKTTLIVVLGTVLGSIVLIVGGAIVAYALLRRKKEMKSKKEEGMNLTSMNDDLERGAGPRRFSHRELAKATNSFSEDRKLGQGGFGAVYRGYFPHMDLTVAVKKISKGSRQGKREYVTEVKIISQLRHRNLVQLIGWCHEKGNFLLVYELMPNGSLDAHLSGKKPPLPWNMRHKIALGLASGVLYLHEEWQQCVVHRDIKSSNVMLDSNFNVKLGDFGLAKLVDHDLGPQTTRLAGTMGYMAPEYVSTGRASKESDVYSFGVVVLEIATGRKANDLMKHGDAEIGLIEWVWDHYGRGELTLAMDEILQKDYNEREVECLMIVGLWCAHPDKNLRPTIRQAIQVLCFEAVLPDLPSKKPVPMYHVPTPNVVSQGASLTTTLQTGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01480 651 SMART serkin_6 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01480 651 Pfam Legume lectin domain 33 267 IPR001220 GO:0030246
Accr10g01480 651 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Accr10g01480 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 264 IPR013320 -
Accr10g01480 651 CDD lectin_legume_LecRK_Arcelin_ConA 33 260 IPR001220 GO:0030246
Accr10g01480 651 Gene3D Transferase(Phosphotransferase) domain 1 418 632 - -
Accr10g01480 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Accr10g01480 651 CDD STKc_IRAK 347 612 - -
Accr10g01480 651 Gene3D - 27 275 - -
Accr10g01480 651 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01480 651 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01480 651 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Accr10g01480 651 SUPERFAMILY Protein kinase-like (PK-like) 325 635 IPR011009 -
Accr10g01480 651 PANTHER - 58 612 - -
Accr10g01480 651 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
Accr10g01480 651 FunFam Lectin-domain containing receptor kinase A4.3 418 631 - -
Accr10g01480 651 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01480 Accr-Chr10 38461671 38463626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01480 1 630 Receptor kinase-like Gene Family AT5G10530 56.964 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr10g01480 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01480 - - qsa:O6P43_033286 847.81