Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01469 ATGATGGAGGAGAAATTTGATATTTGGATATTCAGATTTGTTCTGGTATATGCCCTTTGCATTTTTGTGTTCATCGGATCATCTTCTACAACTGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAACATATACAGATCTTGAGACCAACTTGAGTTACAAATTAGATTACACTTGGTTTCCAGATAGAGCAAGCTGCATAAGCTTGACCAATCATAAGGCAAACCAAAGAGCAAGAGTGTTTGATGTTACAGATAAGGGAAAGAGATGCTACAGCTTGCCAACTATTAAGGACAGAGTGTATATGTTAAGGGGCTCATTTCCACCTGACAATTCACTTGGGGATTTCTCTTTTGATGTGTCAATTGCAGTAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGGAAATAGTTGAGGGAATTTTCAGAGCTTCTAAGAACTCCATAGACTTTTGCTTAGTGAAGAAGGAGCAGGAAGATGGGAATCCTTATATTTCGCAGATCGATTTAAGGCCTTCGCATGAAGAGTATCTGCAGGATTTACCTTCTAGTGTTCTAAAATTGATCAGTAGAAATAATCCAGGAGGCACAGTAAGTGACATCAGGTACCCAATAGACTCAAATGACCGAATCTGGAAAGAAATTTCAATCTCGCCATCATCTCACGTATCATCATTCAATGTCAGCATTTCTGGCCAAATATCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGCTCTTACACATTCTGAGAGATTAGAATTCATTCACAATATCTCAAAAACATGGAACCATGACTACCGCGTGTTCCTCTACTTCCTTGAATTAAGCAATACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTTAATGGTGACCTTAAAGAGAAGAGTTTTGATATTATGTCTGGAGGCTCCAACTATAGACACACAGTGCTGAACGTTTCATCAAATGGTGCAATCAATTTAACCTTGGCCAAAGAATCTGGTTCTGAGTATGGACCACTTTGTAATGCATATGAAATCCTAGAGGTACTTCCACGGAAGAAAGAGACCAATCAAACTGACTTGCAAGAGATGCAGAAGGTGGCAGAAGAGTTGATGATGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGATCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCAACTTTTATCAATAAGTTGGATCTTTCTTCAAGTAATCTCAGAGGACCAATTCCTTCAGGGGTCACTGCGTTGACCAACTTAGAAACATTGAACCTGAGTCACAATAACTTCAAAGGAAGTATCCCTCAATTTCCACCTTTCTCTTCGCTGATATCACTAGATCTGAGCTACAATGATCTCACGGGATCAATTCAGGGATCAATTGCCTCACTGTCACATCTAAAATCCTTATATTTCGGCTGCAATCCTGACATGAGTAAGGAGGTCCCATCAAACTTCAACAGTTCACTCAATACAGATTATGGAAGATGCAACCATAAAAGGTCAAGAATTTCAGCACCACTCATCATTGGAACCGTTACATGTGGGTCTATCTTGCTTACATTGGCTCTTGGATTTCTCTTCGCTTGCCATTATAAGAAACTATCAATTCCATGGGGAGGATTTGTTGCTCAGAAACACCCTAACCCAATGGCAACAAATATCATCTTCTCTTTGCCCAGTAAAGACGATTTCTCCATGAAGTCAGTATGTATTCAAAAGTTTACCCTGGATTATATAGAGATAGCCACCGAGAAGTACAAAACATTAATAGGTGAAGGAGGGTTTGGCTATGTTTACAGGGGACTTATAGATGATGATCAAGAAGTGGCCATGAAAGTCCGTTCAGCCACATCAACTCAGGGAACTAAGGAATTTGAAAATGAGCTAAATCTGCTTTCTGAGATACAGCATGAAAACTTGGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTGGTGTACCCCTTTATGTCCAACGGCTCTTTACAGGAGAGACTTTATGGAGAACGATCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGCTCTGGGTGCAGCTAGAGGTTTGGCATATCTTCATACATTTCCGGGGCGTTCCATTATACACAGGGATGTCAAATCTAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATTTGCTCCTCAGGAAGGAGACATCGGTGCTTCTCTTGAACTAAGAGGAACTGCAGGATATCTGGATCCCGAGTACTATACTACCCAGCAGTTATCTGCAAAAAGTGATGTCTTCAGCTTCGGGGTGGTTCTACTTGAAATCATAAGTGGCCGAGAACCTCTCAACATCCAAAGGCCACGCAACGAGTGGAGCCTAGTGGAATGGGCTAAAGCATATATAAGAGCAGCAAAAATTGATGAGATAGTGGATCCAGGCATAAAAGGAGGGTATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACATTCATGTGTTGAAACCTGCTCACGTTTCAGACATGAGATGGAGGATGTTGTGAGAGAGTTGGAGGATGCTCTAATTATAGAGAACAATGCATCAGAATATATGAAGTCCATAGAGAGCCTTGGAGGCTCCAATCGCTATTCTATTGTAACAGACAAGAGGGTGTTACCACCATCTTCTTCGTCTACAATAGAATCAACCACCATCATAAACCAAACCATGTCCTTCCCACAGCCCAGATAG 2787 0.4076 MMEEKFDIWIFRFVLVYALCIFVFIGSSSTTEGFVSIACCADSTYTDLETNLSYKLDYTWFPDRASCISLTNHKANQRARVFDVTDKGKRCYSLPTIKDRVYMLRGSFPPDNSLGDFSFDVSIAVTSLGSVRPSQDLEIVEGIFRASKNSIDFCLVKKEQEDGNPYISQIDLRPSHEEYLQDLPSSVLKLISRNNPGGTVSDIRYPIDSNDRIWKEISISPSSHVSSFNVSISGQISNVTPPLQVLQTALTHSERLEFIHNISKTWNHDYRVFLYFLELSNTVRSGQRVFDIYLNGDLKEKSFDIMSGGSNYRHTVLNVSSNGAINLTLAKESGSEYGPLCNAYEILEVLPRKKETNQTDLQEMQKVAEELMMQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTFINKLDLSSSNLRGPIPSGVTALTNLETLNLSHNNFKGSIPQFPPFSSLISLDLSYNDLTGSIQGSIASLSHLKSLYFGCNPDMSKEVPSNFNSSLNTDYGRCNHKRSRISAPLIIGTVTCGSILLTLALGFLFACHYKKLSIPWGGFVAQKHPNPMATNIIFSLPSKDDFSMKSVCIQKFTLDYIEIATEKYKTLIGEGGFGYVYRGLIDDDQEVAMKVRSATSTQGTKEFENELNLLSEIQHENLVPLLGYCNENDQQILVYPFMSNGSLQERLYGERSKRKVLDWPTRLSIALGAARGLAYLHTFPGRSIIHRDVKSSNILLDHSMTAKVADFGFSKFAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIISGREPLNIQRPRNEWSLVEWAKAYIRAAKIDEIVDPGIKGGYHAEAMWRVVEVAHSCVETCSRFRHEMEDVVRELEDALIIENNASEYMKSIESLGGSNRYSIVTDKRVLPPSSSSTIESTTIINQTMSFPQPR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01469 928 ProSiteProfiles Leucine-rich repeat profile. 431 453 IPR001611 GO:0005515
Accr10g01469 928 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Accr10g01469 928 SMART serkin_6 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01469 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Accr10g01469 928 Gene3D Transferase(Phosphotransferase) domain 1 673 889 - -
Accr10g01469 928 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 673 882 - -
Accr10g01469 928 FunFam receptor-like protein kinase FERONIA 569 672 - -
Accr10g01469 928 ProSiteProfiles Protein kinase domain profile. 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01469 928 Pfam Protein tyrosine and serine/threonine kinase 600 868 IPR001245 GO:0004672|GO:0006468
Accr10g01469 928 SUPERFAMILY Protein kinase-like (PK-like) 578 869 IPR011009 -
Accr10g01469 928 Gene3D Phosphorylase Kinase; domain 1 569 672 - -
Accr10g01469 928 PANTHER OS07G0107800 PROTEIN-RELATED 35 873 - -
Accr10g01469 928 CDD STKc_IRAK 603 870 - -
Accr10g01469 928 Gene3D Ribonuclease Inhibitor 358 516 IPR032675 -
Accr10g01469 928 SUPERFAMILY L domain-like 380 498 - -
Accr10g01469 928 Gene3D - 189 349 - -
Accr10g01469 928 Pfam Malectin-like domain 41 348 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01469 Accr-Chr10 38291603 38297976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01469 141 905 Receptor kinase-like Gene Family AT2G28970 34.430 7.63e-117 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr10g01469 Malectin_like 1.2e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01469 - - pcin:129311567 1611.66