Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01458 ATGGCATCCTCTGGTTCTGTGTTCTTTATGTTGATCTTCATTTTGCTCTTATCCCTCGAAGACACTGTGCACTCTGTTTTCTTTAACTTCACCAAATTCCAACCAAACATGAACCTAATACAATTCCAAGGCGATGCCTTTTCGTCCGATGATGTTCTTCAGCTCACAAAGAACCGACTCGACGGCCCAATCACAAGCAGTGTTGGTCGAGCTTCGTACGCTGAACCGGTACGTGCGTGGGATAAAAAAACCGGGAAGCTCACAGACTTCATCACCCATTTTACCTTCATCATGCGGCCTGTTTCCACAAAATTCGGCGATGGTATATCCATCTTCCTTTCTCCTTTCCAATCTGAAATCCCAAATAACTCAACTGGCGGTTTCCTTGGTCTCTTCAGTGCAGAATCTGCATTCAATAATAGTAGTACCAATAATTCCATAGTTGCGGTTGAGTTCGACAGCTTTGCCAACACGTGGGATCCAACCTCGGACCATGTCGGAATCAACGTTAATTCCATTGTATCAGTTGCGAATGTTTCATGGAATAGCAGCATGAAGGATGGGAAAATTGGTAATGTTTGGATAGAATATAGTTCCACCACGAAAAATCTAAGTGTTTTCCTTACTTATGCTGAAAATCCAATTTTTATGGGTAATTCTAGCGTTTGGCATATTATTGATTTGAGGGAAGTTTTGCCAGAATGGGTCCGTGTTGGATTCTCTGCTTCTACAGGGGATTGGGTTGAATTACACAAAATTGTATCTTGGTCGTTCAATTCAAGCTTGGAAAGTGATATCAATAATGGGAAAAACAAGAGGGTTGTTTTGGGGGTTAGTTTAAGCGTAGGTCTTGGTTTTCTTATTTGTGTTTCTGGACTGTTATGGTTCACTATCTGGAGAAAGAAACATTACAGGAAGAAGGAAGAAAAAGGTAAAGGCTTTGAAGCTTCCATGGATGATGAATTTGAGAAAGGAACAGGGCCAAAGAGATTCACCTACCAGGAGCTGAGTCAAGCAACAAATCATTTCTCTGAAGCAGGGAAGCTAGGAGAAGGAGGATTTGGAGGTGTATACAAAGGTTTTCTCACAAACGAAAACCTACAAGTAGCTGTGAAGAGAGTTTCAAAAGGATCAAAACAGGGGAAAAAAGAATACATATCAGAAGTGAGAATCATCAGCAGGTTGAGACACAGAAACTTAGTACAACTCATTGGCTGGTGCCACGAACAAGGTGAGTTCCTTCTTGTTTACGAATTCATGCCTAATGGAAGTCTAGATTCCCACCTTTTCGGAAACAAAACCCCGCTTACTTGGACCGTGAGGTACAAGATAGCCTTGGGTTTGGCCTCTTCTCTCTTGTATCTCCACGAAGAATGGGAACAATGTGTAGTTCACAGAGATATCAAGTCAAGTAATGTTATTTTAGACGCAAACTTCAACGCAAAACTTGGAGATTTCGGCCTTGCGAGGCTAGTTGACCATGAACTTGGGTCTCAAACCACGGTTCTGGCAGGCACAATGGGGTACTTAGCCCCAGAGTGTGTAACCACAGGAAAAGCGAGTAAAGAATCTGATGTTTACAGTTTCGGGGTAGTCGCCCTAGAGATCACATGTGGAAGAAGACCAGTTGATGTAAGAGTTGATGAACCAGGAAAGGTAAGGATGGTGGAGTGGGTGTGGGACCTATATGGGAAAGGGATGCTTCTAGAAGCTGCTGATAAGAAACTGAATTTGGAATATGATGAGAGACAAATAGAAAGCTTGATGATTGTAGGGTTATGGTGTTGCCATCCTGACCAGGGGATGAGACCTTCCATAAGGCAAGTCATTAAAGTTCTGAACTTTGAAGCTACTTTGCCAAGCCTTCCTTTAAAGCTTCCTGTTCCTATGTATTATGCTCCTCCAATGGAAATGTGCAGATTCTCATACACGTCGTCTGGGCCCACTGCTTCAACCAAAGGATCTTCATACTCATCTGTATCAAGAGGATCCAGAAAGTCCCTCTTGTCAGATCAATGA 2019 0.4264 MASSGSVFFMLIFILLLSLEDTVHSVFFNFTKFQPNMNLIQFQGDAFSSDDVLQLTKNRLDGPITSSVGRASYAEPVRAWDKKTGKLTDFITHFTFIMRPVSTKFGDGISIFLSPFQSEIPNNSTGGFLGLFSAESAFNNSSTNNSIVAVEFDSFANTWDPTSDHVGINVNSIVSVANVSWNSSMKDGKIGNVWIEYSSTTKNLSVFLTYAENPIFMGNSSVWHIIDLREVLPEWVRVGFSASTGDWVELHKIVSWSFNSSLESDINNGKNKRVVLGVSLSVGLGFLICVSGLLWFTIWRKKHYRKKEEKGKGFEASMDDEFEKGTGPKRFTYQELSQATNHFSEAGKLGEGGFGGVYKGFLTNENLQVAVKRVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMPNGSLDSHLFGNKTPLTWTVRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVILDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGVVALEITCGRRPVDVRVDEPGKVRMVEWVWDLYGKGMLLEAADKKLNLEYDERQIESLMIVGLWCCHPDQGMRPSIRQVIKVLNFEATLPSLPLKLPVPMYYAPPMEMCRFSYTSSGPTASTKGSSYSSVSRGSRKSLLSDQ 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01458 672 FunFam Lectin-domain containing receptor kinase A4.3 420 633 - -
Accr10g01458 672 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01458 672 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
Accr10g01458 672 MobiDBLite consensus disorder prediction 648 672 - -
Accr10g01458 672 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01458 672 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Accr10g01458 672 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Accr10g01458 672 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Accr10g01458 672 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01458 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 265 IPR013320 -
Accr10g01458 672 PANTHER - 42 623 - -
Accr10g01458 672 SUPERFAMILY Protein kinase-like (PK-like) 327 641 IPR011009 -
Accr10g01458 672 Pfam Legume lectin domain 28 267 IPR001220 GO:0030246
Accr10g01458 672 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Accr10g01458 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Accr10g01458 672 FunFam L-type lectin-domain containing receptor kinase IX.1 24 271 - -
Accr10g01458 672 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Accr10g01458 672 Gene3D - 24 276 - -
Accr10g01458 672 CDD STKc_IRAK 357 614 - -
Accr10g01458 672 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01458 Accr-Chr10 38070837 38072855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01458 1 632 Receptor kinase-like Gene Family AT5G10530 51.166 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr10g01458 Pkinase 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01458 - - gmx:100777201 941.414