Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr10g01456 | ATGTATAATGGGATCGTTACCGTTACATTGTCAAGGCCAGACGGCAATTTGATAGGAGTATCCTATAATGGGATTGATAACCTTCTTGAACCTCGTACTCATCCTGCTAATAGAGGGTATTGGGACTTTTCTTGGAACGCACCAGGTTACCGCAGTAACTATGACAGATTCAGAGGGACAACGTTTTCTGTTATAGTGGAGAACAAAGACCAAGCCGAAGTTTCTTTCTTATACACATGGAATCCTACCTCGCCTGCAAGAAGCATGCCAATGAATATAGATATAAGGTATATTTTACGTAGAGGCAGCTCAGGATTATATTCATATGCCATATTGGAGCGTCTAGAAGGTTTTCCTGCCATTCGGGTGGATGTCTTTAGGCTCACTTATAAGCTCAACCAATACCTGTTCCATTACATGGCTATAACAGACGAAAGGCAGAGAGAAATGCCTAGTGCTGAAGATAGATCCAAAGGCCAAACCCTTGATTATCCTGAAGCTGTCCTATTAACCAATCCTAGTAACCATGAATTCTTAGGGGAGGTGGATGATAAATACATGTACTCGGTTGAGAACAAAGACAACAAAGTTAACGGATGGGTCTCTTTCAACACTCCCAATTCTTCATCAGTTGGGTTCTGGATGATTACACCCAGCAACGAATTCCGTAATGGTGGACCTACCAAGCAAAGTCTCACCTCTCATGTTGGCCCTGTCACCCTCAACTCTTTCCTGAGCCCACACTATGCTGGGAAGGACATATCCATGTTCTTCAGAGAGGGAGAGACCTATAAGAAGGTATTTGGCCCCACCTTTTTGTACCTCAACACTGTTCCAAATCCCCATGATTCTCAGACTCTCTGGGGGGATGCTAAAAACCAGATGCAAAAAGAAGTTGAAAGCTGGCCCTATGATTTCCCAAGATCAAAAGACTTCATTCCGTCCAATCAACGGGGAAAAGTGTCTGGACAATTACTAATCACAGGGTACCCTGCCAGTATTCCATCTGGTAATGCTAACGTTGGCCTGGCCCTCCCAGGATATGAAGGATCATGGCAAACAGAAAGCAAGGGTTATCAATTTTGGACCCAAGCTGATAACAGTGGCTTGTTTACCATACAAAATGTTGTGCCTGGGGTCTATAACTTGTATGCTTGGGTGCCTGGCATTCTTGGTGATTACAAATACGAGTTTGACATTACCATCAAACCAGGAGATGCCATAGAATTAGGTCAGTTAAATTATAGGCCTCCAAGAAATGGTCCAACGGTTTGGGAAATTGGGATTCCTGATCGATCAGCCCAAGAGTTTTATGTGCCAGACCCATATCCTAACCTCATTAACAAGTTATTTTTAGGAAAGCCCAATCACAGGTTTAGACAATACGGTTTGTGGAAACGCTACTCTGAATTATATCCAACTAATGACCTCGTTTACCATGTTGGTGTCAGTGATTATTCCAAACATTGGTTCTATGCTCAGGTCCCCAGGGGCCTGGGAAATGGCACATACACTTCAACAGTATGGGAGATAAGATTTGAATTGCCATTTGTGATTCCAGGAAGTTATACACTACATATTGGCTTAGCATCATCCAGCAGTTATCACTTGCGTGTTTGGTTCAATAATGGCGCTGATCGTCGCATGCGGTTCAATACAAGATTAAGAGGAGGAGATCAGGACAATGCAATAGCAAGGCATGGTATACATGGATTGTGCTGGTGGTACAGTTACCAAGTGCCAAGCTATCTACTTATGAATGGAACCAACTCTATTTACCTCTCACCATTCAGAGTCTTTTCTCCTCTTCAAGGTATTATGTATGATTATATCCGTCTTGAAAGCCCCTAG | 1851 | 0.43 | MYNGIVTVTLSRPDGNLIGVSYNGIDNLLEPRTHPANRGYWDFSWNAPGYRSNYDRFRGTTFSVIVENKDQAEVSFLYTWNPTSPARSMPMNIDIRYILRRGSSGLYSYAILERLEGFPAIRVDVFRLTYKLNQYLFHYMAITDERQREMPSAEDRSKGQTLDYPEAVLLTNPSNHEFLGEVDDKYMYSVENKDNKVNGWVSFNTPNSSSVGFWMITPSNEFRNGGPTKQSLTSHVGPVTLNSFLSPHYAGKDISMFFREGETYKKVFGPTFLYLNTVPNPHDSQTLWGDAKNQMQKEVESWPYDFPRSKDFIPSNQRGKVSGQLLITGYPASIPSGNANVGLALPGYEGSWQTESKGYQFWTQADNSGLFTIQNVVPGVYNLYAWVPGILGDYKYEFDITIKPGDAIELGQLNYRPPRNGPTVWEIGIPDRSAQEFYVPDPYPNLINKLFLGKPNHRFRQYGLWKRYSELYPTNDLVYHVGVSDYSKHWFYAQVPRGLGNGTYTSTVWEIRFELPFVIPGSYTLHIGLASSSSYHLRVWFNNGADRRMRFNTRLRGGDQDNAIARHGIHGLCWWYSYQVPSYLLMNGTNSIYLSPFRVFSPLQGIMYDYIRLESP | 616 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr10g01456 | 616 | Pfam | Rhamnogalacturonate lyase family | 2 | 182 | IPR010325 | - | |
Accr10g01456 | 616 | SUPERFAMILY | Galactose mutarotase-like | 6 | 283 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Accr10g01456 | 616 | CDD | RGL4_N | 3 | 284 | - | - | |
Accr10g01456 | 616 | Pfam | Polysaccharide lyase family 4, domain III | 423 | 613 | IPR029411 | - | |
Accr10g01456 | 616 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 1 | 616 | - | - | |
Accr10g01456 | 616 | Gene3D | - | 421 | 614 | - | - | |
Accr10g01456 | 616 | Gene3D | - | 313 | 410 | - | - | |
Accr10g01456 | 616 | Gene3D | - | 7 | 291 | IPR014718 | GO:0030246 | |
Accr10g01456 | 616 | Pfam | Polysaccharide lyase family 4, domain II | 339 | 409 | IPR029413 | - | |
Accr10g01456 | 616 | CDD | RGL4_M | 317 | 413 | IPR029413 | - | |
Accr10g01456 | 616 | CDD | RGL4_C | 425 | 614 | - | - | |
Accr10g01456 | 616 | SUPERFAMILY | Starch-binding domain-like | 314 | 410 | IPR013784 | GO:0030246 | |
Accr10g01456 | 616 | SUPERFAMILY | Galactose-binding domain-like | 420 | 614 | IPR008979 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr10g01456 | Accr-Chr10 | 37996005 | 38000536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr10g01456 | 1 | 616 | Polysaccharide Lyase | AT1G09890 | 52.809 | 0.0 | 642 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr10g01456 | K18195 | - | gmx:100792575 | 794.653 |