Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01454 ATGGAGCATCCAAAGAAAGCGTTTGGATGGGCTGCTAGGGATACTTCTGGCCTTCTCTCTCCCTTCCGCTTCTCTAGAAGGCAAACTGGAGAGAAAGACGTGACGTTTAAAGTGTTGTATTGCGGGATTTGCCACTCGGACCTCCACATGATTAGGAATGAGTGGAACAATTCCATCTATCCACTTGTACCCGGGCACGAAATCGTTGGTGAAGTAACAGAGGTGGGAACAAAGGTTGAAAAGTTCAAAGTTGGAGACATGGTAGGGGTGGGGTGCATGGTTGGTTCATGTGGCTCATGCCAAAGCTGTGCCGAAAATCTTGAAAATTACTGCCCAAAAATGATTCTCACATATGGTGCAGAGTATGTCGATGGGAGCATCACATATGGAGGTTACTCTGACTTAATGGTTGCGGATGAACACTTTGTGATCCGCATTCCAGACAACCTTCCTCTTGATGCTGCTGGTCCTCTTCTTTGTGCTGGGATCACTGTATATAGTCCTTTGAGGCATTTCGGGCTAGACAAGCCTGGTGTACATGTTGGTGTGGTTGGCCTTGGAGGTGTAGGCCATATGGCTGTGAAGTTTGCCAAGGCCTTTGGTGCTAATGTGACAGTAATAAGTACATCACCTGATAAGAAGGAGGAAGCAATAAAGAATTTAGGAGCTGACTCCTTTGTGGTCAGCCGAGAGCGAGATCAGATGCAGGCTGTAATGGGTACCCTTGACGGTATCATTGACACTGTTTCTGCTGTCCATCCTCTCTTGCCTTTGATTGCTTTATTGAAATCTCAAGGAAAACTCGTTATGGTCGGTGTCCCAGAGAAGCCTCTAGAACTACCAGTCTTTCCTTTACTTATGGGGAGAAAGTTGGTAGCTGGGACTCTTATTGGAGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAGCACAATGTCAAACCAGACATTGAGGTGGTTCCAATTGACTATGTGAACAAGGCAATGGAGCGTCTCGCTAAAGCAGATGTAAAGTATCGATTTGTCATCGACATAGGAAACACACTGAAGCCAGATCCTTCTCGCGATTGA 1077 0.4605 MEHPKKAFGWAARDTSGLLSPFRFSRRQTGEKDVTFKVLYCGICHSDLHMIRNEWNNSIYPLVPGHEIVGEVTEVGTKVEKFKVGDMVGVGCMVGSCGSCQSCAENLENYCPKMILTYGAEYVDGSITYGGYSDLMVADEHFVIRIPDNLPLDAAGPLLCAGITVYSPLRHFGLDKPGVHVGVVGLGGVGHMAVKFAKAFGANVTVISTSPDKKEEAIKNLGADSFVVSRERDQMQAVMGTLDGIIDTVSAVHPLLPLIALLKSQGKLVMVGVPEKPLELPVFPLLMGRKLVAGTLIGGMKETQEMIDFAAKHNVKPDIEVVPIDYVNKAMERLAKADVKYRFVIDIGNTLKPDPSRD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01454 358 Gene3D - 10 347 - -
Accr10g01454 358 Pfam Alcohol dehydrogenase GroES-like domain 32 145 IPR013154 -
Accr10g01454 358 Pfam Zinc-binding dehydrogenase 188 311 IPR013149 -
Accr10g01454 358 FunFam Uncharacterized protein 10 160 - -
Accr10g01454 358 FunFam Cinnamyl alcohol dehydrogenase 161 317 - -
Accr10g01454 358 Gene3D - 161 317 - -
Accr10g01454 358 PANTHER ALDEHYDE REDUCTASE 2 350 IPR047109 GO:0016616
Accr10g01454 358 FunFam Putative cinnamyl alcohol dehydrogenase 6 318 347 - -
Accr10g01454 358 CDD CAD1 8 346 IPR047109 GO:0016616
Accr10g01454 358 SUPERFAMILY GroES-like 15 178 IPR011032 -
Accr10g01454 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Accr10g01454 358 SMART PKS_ER_names_mod 17 345 IPR020843 GO:0016491
Accr10g01454 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 316 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01454 Accr-Chr10 37948985 37951247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01454 5 356 Monolignol Biosynthesis Gene Families AT4G37990 71.875 5.09e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01454 K23232 - gmx:100809071 585.874