Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01453 ATGGCAAACACTTCTGTCTCATCAGCTCATCTAGAAAACGAGAGAACACACGCCTATGGATATGCCGCCAGAGACTCCTCAGGAATTGTCTCCCCGTTTCAATTCACCAGAAGGGCCAATGGAGATAATGATATCACCATCAGGATATTGTACTGTGGGATTTGCCACGGCGATGTTCATTTTCTCAGGAACGAAATGCATTTGCCAGAAGGCTATATCTTCTATCCTATGGTTGCCGGGCACGAGATTGTGGGGGAAGTGATAAAGGTGGGTCGTAATGTACAGAAATTCAAAGCTGGGGACATTGCAGGTGTAGGTCCAACTTTTGATTCGTGTCGCTCCTGTTCTCACTGCAACGAAGGTTTAGAAGTATATTGCCCCAAAACTATCATGACTTATAATGCAATTGATAAGGATGGATCTGTGACCTATGGTGGGTATTCTGATAACACCGTGGTTGATGAACATTTTGCCGTGAAAATACCAAATGGCATGCCCCTTGACGGAGCAGCACCATTGTTGTGTGCTGGGCTCACAGTGTACAGCCCATTGAAGTACTATGGCTTGTGTGAGGCTGGTATGCATTTGGGTGTGGTAGGGTTGGGTGGACTGGGCCACGTGGCAGTCAAGTTTGCTAAGGCTATGAACATGAAGGTGACTGTGATAAGTACTTCTCCTGGGAAGAAGAAGGAAGCTTTGGAAAGACATGGTGCTGATGCTTTCATAGTCAGTAATGACCAACAACAAATGCAGGAAGCCAGGGGGACCATGGATGGAATTATAGACACGGTCGCTGGAAATCACTCTGTTCATCCATTGGTTGATTTGTTGAAGACAGGAGGGAAATTGGTTGTGGTAGGAGCACCAATGCAAGAACCTCAGTTACCAGTCGTTCCTTTAATCATGGGGAGAAAGACAATTGCAGGAAGTGCAGGAGGAGGAATGAAAGAGAGCCAAGAGATGATTGATTTTGCAGCGAAGCACAATATAACAGCAGACATTGAGCTGATTCCCATGGATTATGTGAACACTGCCTTAGAGAGAGTTTCAAAGAATGATGTTAAGTATCGTTTTGTGATTGATGTCGCCAACACTCTTCATAAGGACGCATCTGCTGCCACTAGTTAA 1128 0.4539 MANTSVSSAHLENERTHAYGYAARDSSGIVSPFQFTRRANGDNDITIRILYCGICHGDVHFLRNEMHLPEGYIFYPMVAGHEIVGEVIKVGRNVQKFKAGDIAGVGPTFDSCRSCSHCNEGLEVYCPKTIMTYNAIDKDGSVTYGGYSDNTVVDEHFAVKIPNGMPLDGAAPLLCAGLTVYSPLKYYGLCEAGMHLGVVGLGGLGHVAVKFAKAMNMKVTVISTSPGKKKEALERHGADAFIVSNDQQQMQEARGTMDGIIDTVAGNHSVHPLVDLLKTGGKLVVVGAPMQEPQLPVVPLIMGRKTIAGSAGGGMKESQEMIDFAAKHNITADIELIPMDYVNTALERVSKNDVKYRFVIDVANTLHKDASAATS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01453 375 PANTHER ALDEHYDE REDUCTASE 14 365 IPR047109 GO:0016616
Accr10g01453 375 CDD CAD1 20 361 IPR047109 GO:0016616
Accr10g01453 375 FunFam Putative cinnamyl alcohol dehydrogenase 6 333 362 - -
Accr10g01453 375 Pfam Zinc-binding dehydrogenase 203 326 IPR013149 -
Accr10g01453 375 Pfam Alcohol dehydrogenase GroES-like domain 43 161 IPR013154 -
Accr10g01453 375 SMART PKS_ER_names_mod 28 360 IPR020843 GO:0016491
Accr10g01453 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 330 IPR036291 -
Accr10g01453 375 Gene3D - 176 332 - -
Accr10g01453 375 SUPERFAMILY GroES-like 26 193 IPR011032 -
Accr10g01453 375 Gene3D - 21 362 - -
Accr10g01453 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 80 94 IPR002328 GO:0008270|GO:0016491
Accr10g01453 375 FunFam Cinnamyl alcohol dehydrogenase 176 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01453 Accr-Chr10 37941745 37943277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01453 15 366 Monolignol Biosynthesis Gene Families AT4G37990 61.364 7.28e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01453 K23232 - qlo:115967174 498.819